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jalview.git
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3076ensemblGeneId' into develop commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterJAL-3076 clarify javadoc handling single sequence respo... bug/JAL-3076ensemblGeneId commit | commitdiff | tree | snapshot
2018-08-15 gmungocJAL-3080 remove tree partition if no groups created feature/JAL-3080clearTreeGroups commit | commitdiff | tree | snapshot
2018-08-14 gmungocJAL-3078 reset Tree font (only!) on Cancel bug/JAL-3078cancelTreeFont commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3018 updated to Ensembl REST 7.0 commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3076 refactor for more efficient scan of 'gene... commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of... commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterJAL-3047 don't set classes unconditionally (forgot... task/JAL-3047_clovercoverage commit | commitdiff | tree | snapshot
2018-07-12 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2018-07-02 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop commit | commitdiff | tree | snapshot
2018-07-02 Jim ProcterJAL-3047 don’t let the makedist task complete if a... commit | commitdiff | tree | snapshot
2018-07-02 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrument... commit | commitdiff | tree | snapshot
2018-06-27 Jim ProcterJAL-3047 enable clover for testng commit | commitdiff | tree | snapshot
2018-06-27 Jim ProcterJAL-3047 ignore clover output dir commit | commitdiff | tree | snapshot
2018-06-27 Jim ProcterJAL-3047 ant -Dclover.jar=../path/to/clover/lib/clover... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterMerge branch 'task/JAL-3042_remove_SimpleDocument_depen... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3042 remove mention of adjustable search box histor... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3042 don't allow user to change default history... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 removed jdas in libs documentation and noted... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 documentation in 2.11 release notes (and 2... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 remove DAS UI documentation commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more ! commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 (unrelated) random XML error in nbbuild.xml commit | commitdiff | tree | snapshot
2018-06-07 gmungocJAL-2755 correct Javadoc and error handling commit | commitdiff | tree | snapshot
2018-06-06 gmungocJAL-3013 ensure Chimera as a symlink gets resolved commit | commitdiff | tree | snapshot
2018-06-04 gmungocJAL-2808 update test for revised treatment of 'mixed... commit | commitdiff | tree | snapshot
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList commit | commitdiff | tree | snapshot
2018-06-04 gmungocJAL-3018 updated REST versions to 6.3 commit | commitdiff | tree | snapshot
2018-05-31 gmungocJAL-2808 don't capture or report min-max for mixed... commit | commitdiff | tree | snapshot
2018-05-31 gmungocJAL-2808 pre-fill numeric inequality filter with min... commit | commitdiff | tree | snapshot
2018-05-28 gmungocMerge branch 'bug/JAL-797' into develop commit | commitdiff | tree | snapshot
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2... commit | commitdiff | tree | snapshot
2018-05-26 Jim ProcterJAL-2999 release date for 2.10.4b1 set for 27th May... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'documentation/JAL-2999_r2104b1' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2991_exporttosvgwrapview' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'feature/JAL-2994chimeraPath' into release... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 clarify release notes - and mention that short... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-2994 add a few future release points for good measu... feature/JAL-2994chimeraPath commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 temp variable for clearer conditional and... bug/JAL-1460_dragndropWindows commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 javadoc commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2995 tooltip on fields with double-click to browse... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2994 temporary patch with paths to Chimera for... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-2999 issues resolved (or nearly so) for 2.10.4b1 commit | commitdiff | tree | snapshot
2018-05-24 gmungocJAL-2997 additional tests commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 tidied up the use of windows link file parser commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 more complete drag'n'drop debugging info and... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 process .lnk files dragged to Jalview when... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 new data flavor for URLs added belt-and-braces... commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2993 AlignFrame listen for keystrokes in OverviewPanel commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2997 unit test commit | commitdiff | tree | snapshot
2018-05-23 Jim Procterfix for JAL-2991 - we could do better :/ bug/JAL-2991_exporttosvgwrapview commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2997 handle tab-delimited trailing column number... commit | commitdiff | tree | snapshot
2018-05-23 Jim ProcterJAL-2999 release notes and version bump for jalview... commit | commitdiff | tree | snapshot
2018-05-23 Jim ProcterJAL-2895 replace $$Jalview-Version$$ in help.jhm with... commit | commitdiff | tree | snapshot
2018-05-21 gmungocJAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW bug/JAL-797 commit | commitdiff | tree | snapshot
2018-05-11 gmungocJAL-2986 corrected findIndex for out of range residue... commit | commitdiff | tree | snapshot
2018-05-11 gmungocJAL-2986 additional asserts for SequenceCursor updates commit | commitdiff | tree | snapshot
2018-05-11 gmungocJAL-2986 failing test added commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterJAL-2920 release notes Release_2_10_4 commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into... commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterJAL-2920 basic test for Description from features with... commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterJAL-2920 simplified logic and added corner cases for... commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterJAL-2906 update release date and release notes commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterJAL-2931 patch IA paths for new build box commit | commitdiff | tree | snapshot
2018-05-09 gmungocJAL-2984 add pdb as sequence(s) if associate structure... commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterMerge branch 'patch/JAL-2976_vaqua4_fallback' into... commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterJAL-2976 fixed bad equivalence check and implemented... commit | commitdiff | tree | snapshot
2018-05-08 Jim ProcterJAL-2321 release notes commit | commitdiff | tree | snapshot
2018-05-08 Jim ProcterMerge branch 'patch/JAL-2321_addsecstrForDroppedPDBFile... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 patch test to ensure structures are actually... patch/JAL-2321_addsecstrForDroppedPDBFile commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 ensure default is ‘parseImmediately=true’ commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 use configured values for structure derived... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 add secondary structure & temp factor if not... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 use StructureImportSettings singleton settings... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 isParseImmediately() allows the parse() method... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 allow JmolParser to be configured before parsi... commit | commitdiff | tree | snapshot
2018-05-07 gmungocJAL-2808 ensure test setUp/tearDown alwaysRun commit | commitdiff | tree | snapshot
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2906 apply GPLv3 license source commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2960 don’t override a swing method and create infin... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' of source... commit | commitdiff | tree | snapshot
2018-05-04 gmungocJAL-2906 small tweaks to release notes commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2906 2.10.4 release for 8th May 2018 commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2906 removed mention of experimental features,... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2976 patch NPE when trying to open Uniprot FTS commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2929 JAL-2922 release notes commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2976 typo in installAnywhere build for VAqua dependency commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2960 release notes commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2948 transfer features/annotation is now available... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2960 raise the structure view after adding structur... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2976 Vaqua fallback release notes JAL-2906 commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterMerge branch 'patch/JAL-2976_vaqua4_fallback' into... commit | commitdiff | tree | snapshot
2018-05-02 Jim ProcterJAL-2976 fallback to Vaqua for Macs that don’t work... commit | commitdiff | tree | snapshot
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