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jalview.git
2006-02-03
amwaterhouse
AA properties added
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2006-02-03
amwaterhouse
AA Properties
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2006-02-03
amwaterhouse
New images
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2006-02-03
amwaterhouse
Updated images
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2006-02-03
amwaterhouse
removed
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2006-02-03
amwaterhouse
Removed
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2006-01-30
amwaterhouse
Cancel button is now close button
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2006-01-30
amwaterhouse
Dont draw origin beyond end of alignment
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2006-01-30
amwaterhouse
No need for apply button, just update colours when...
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2006-01-30
amwaterhouse
Get min and max colour added
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2006-01-30
amwaterhouse
Can be used for annotation colouring
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2006-01-30
amwaterhouse
Faster paint
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2006-01-30
amwaterhouse
Use Antialias flag
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2006-01-30
amwaterhouse
Smooth fonts added
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2006-01-30
amwaterhouse
Null sequence check
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2006-01-30
amwaterhouse
Monospaced indicator
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2006-01-30
amwaterhouse
Unix drag and drop implemented
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2006-01-30
amwaterhouse
GraphGroups added
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2006-01-30
amwaterhouse
Fast paint update
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2006-01-30
amwaterhouse
Anti alias flag
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2006-01-30
amwaterhouse
Drop annotations onto alignment
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2006-01-30
amwaterhouse
Smooth fonts, annotation Colour
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2006-01-30
amwaterhouse
Smooth font option
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2006-01-30
amwaterhouse
AddAnnotation with start index
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2006-01-30
amwaterhouse
New Class
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2006-01-30
amwaterhouse
New files
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2006-01-30
amwaterhouse
Faster painting
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2006-01-30
amwaterhouse
Allow features in overview window
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2006-01-30
amwaterhouse
Allow embedded applet
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2006-01-12
jprocter
PIR file IO now preserves and parses Modeller style...
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2006-01-12
jprocter
DBRefEntry made for sequences retrieved from the PDB
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2006-01-12
jprocter
<No Comment Entered>
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2006-01-12
jprocter
ensured properties are loaded before loggers are initia...
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2006-01-11
jprocter
refactored Alignframe padGaps code to Alignment and...
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2005-12-22
amwaterhouse
Check for null StringBuffer in getPDB
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2005-12-22
amwaterhouse
Check for null StringBuffer in getPDB
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2005-12-22
amwaterhouse
Jar file 20% smaller
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2005-12-22
amwaterhouse
Reduced jar size by 20%
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2005-12-22
amwaterhouse
Allow embedded applet
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2005-12-22
amwaterhouse
graph now has type, not a boolean
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2005-12-22
amwaterhouse
Watch for trim left/right null widths
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2005-12-22
amwaterhouse
REGEX CANNOT BE STATIC
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2005-12-22
amwaterhouse
Wrapped search scrolls to visible result
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2005-12-22
amwaterhouse
Remove import
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2005-12-22
amwaterhouse
Annotations.Graph can be bargraph, linegraph
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2005-12-22
amwaterhouse
Remove printPoints
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2005-12-22
amwaterhouse
Remove main method
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2005-12-22
amwaterhouse
Load assocated tree
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2005-12-16
jprocter
Todo notes for feature issue: 0011711
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2005-12-15
amwaterhouse
Close body and html, dont put in table
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2005-12-15
amwaterhouse
Prevents confusing extra line being output in Java...
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2005-12-15
amwaterhouse
SetMenuBar(null) when closing frames. Prevents a bug...
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2005-12-13
amwaterhouse
Broken link fixed
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2005-12-13
amwaterhouse
Broken link fixed
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2005-12-13
amwaterhouse
Version update
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2005-12-13
amwaterhouse
Builds web TOC for help files
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2005-12-13
amwaterhouse
Link to applets.html
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2005-12-12
amwaterhouse
Applet new features
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2005-12-12
amwaterhouse
Remove unused mappings
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2005-12-12
amwaterhouse
GetAlignment uses active alignment window
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2005-12-12
amwaterhouse
Inlude mcview in build applet
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2005-12-12
amwaterhouse
Change dataset name
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2005-12-12
amwaterhouse
Change title
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2005-12-12
amwaterhouse
Release date
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2005-12-12
amwaterhouse
DOnt mention WSWublast for now
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2005-12-12
amwaterhouse
Jbinit
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2005-12-12
amwaterhouse
Font size label
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2005-12-12
amwaterhouse
Dont bother with WSWUBlast for now
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2005-12-12
amwaterhouse
FOnt size -3 for labels
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2005-12-12
amwaterhouse
Check if user cancelled before making image
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2005-12-12
amwaterhouse
Set font italic
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2005-12-12
amwaterhouse
Font changes on export png/eps
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2005-12-12
amwaterhouse
Getmask is slightly wider
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2005-12-09
jprocter
added description of how PDB structures can be associat...
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2005-12-09
jprocter
Rearranged 'What's new' and debugged/verified the seque...
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2005-12-09
jprocter
fixed pdbentry creation and multiple uniprot or pdb...
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2005-12-09
amwaterhouse
Change order of repaint if wrapped
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2005-12-09
amwaterhouse
Applet Structure viewer has all colours available
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2005-12-09
amwaterhouse
Can be used by PDBViewer
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2005-12-09
amwaterhouse
All colours added to Structure viewer
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2005-12-09
amwaterhouse
Only load the tree file once, for first alignment
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2005-12-09
amwaterhouse
Keylistener added to frame and seqcanvas
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2005-12-08
jprocter
context dependent title for when called from desktop...
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2005-12-08
jprocter
changed WhatsNew to a folder and modified preferences...
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2005-12-08
amwaterhouse
If dataset seq exists for paste to existing alignment...
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2005-12-08
jprocter
added some error checking and instruction dialogs
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2005-12-08
amwaterhouse
Should call deselectAll when escape pressed
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2005-12-08
amwaterhouse
Dont repaint if component has been removed
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2005-12-08
amwaterhouse
SeqColoursReady
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2005-12-08
jprocter
modified jnet parsing exception report string.
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2005-12-08
jprocter
exception checks for (de)uniquify
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2005-12-08
amwaterhouse
Clustal colour added to table
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2005-12-08
amwaterhouse
SeqColoursReady boolean added
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2005-12-08
amwaterhouse
UnknownSequences.remove moved out of loop
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2005-12-08
amwaterhouse
showAnnotation state loaded
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2005-12-08
amwaterhouse
null pointer in wrapped mode, click near sequence
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2005-12-08
amwaterhouse
new help
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2005-12-08
amwaterhouse
Updated help
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2005-12-08
amwaterhouse
Revert to version 1.25
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2005-12-08
amwaterhouse
After merge
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