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jalview.git
2023-11-10 Ben SoaresJAL-4059 Checked through and fixed build tasks commit | commitdiff | tree | snapshot
2023-11-09 Ben SoaresJAL-4059 Fix up Jsmol calls and delete html files from... commit | commitdiff | tree | snapshot
2023-11-07 Ben SoaresJAL-4059 fix that boolean for non-value query string... commit | commitdiff | tree | snapshot
2023-11-07 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... commit | commitdiff | tree | snapshot
2023-11-07 Ben SoaresJAL-4059 --timeout not needed with --virtual-time-budget commit | commitdiff | tree | snapshot
2023-11-03 Ben SoaresJAL-4239 Using own id generation to avoid Random.nextLo... commit | commitdiff | tree | snapshot
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff | tree | snapshot
2023-11-03 James ProcterJAL-4090 tweak what’s new commit | commitdiff | tree | snapshot
2023-11-02 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 reported new known issue JAL-4328 commit | commitdiff | tree | snapshot
2023-11-02 Ben SoaresJAL-4059 updated _j2sclasslist.txt commit | commitdiff | tree | snapshot
2023-11-02 Ben SoaresJAL-4059 updated test for StringUtils commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4192 minimal specification of gradle version in... commit | commitdiff | tree | snapshot
2023-11-02 Ben SoaresJAL-4059 New namespaced query string parameters. commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 fix up release notes - add notes or JAL-4216... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4169 fix up urls to faq and documentation commit | commitdiff | tree | snapshot
2023-11-02 Ben SoaresJAL-4059 swingjs and Jmol-SwingJS.zip from Jmol github. commit | commitdiff | tree | snapshot
2023-11-02 Ben SoaresJAL-4059 Update closure-compiler. commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 known issue report for JAL-4517 commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 release notes for JAL-1713 JAL-2528 and known... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-3921 release notes commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'patch/JAL-3921_jmol_session_save' into... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3921_jmol_session... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4217 wrap progress bar creation in an invokeLater... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-3088 release notes JAL-4090 commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-1551 formatting commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'patch/JAL-3088_finalbracenotinrightplace... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3088_finalbraceno... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 update release date to friday 3rd November commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4293 JAL-4325 release notes commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4218 patch and release notes - don’t inclu... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 marked JAL-4290 as a knowndefect commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4110 JAL-3599 release notes commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4310 JAL-4298 JAL-4282 JAL-4223 release... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4147 documentation for revised sequence... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 release notes for JAL-4304,JAL-4305 and JAL... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4289 JAL-4253 lower end of group boundary vertical... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4090 JAL-4281 JAL-4311 release notes commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'patch/JAL-4281_idwidthandannotHeight_in_p... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4281 patch test so it passes on build server and... patch/JAL-4281_idwidthandannotHeight_in_project commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4090 release notes for JAL-4315 commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'feature/JAL-4315_fc_draganddrop' into... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4090 JAL-4317 release notes commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'patch/JAL-4317_enablefeaturewhenadjusting... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'develop' into patch/JAL-4281_idwidthandan... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'patch/JAL-4260_fix_up_select_via_ruler_in... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4260 encapsulate logic for resolving nearest column... patch/JAL-4260_fix_up_select_via_ruler_in_wrapped commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4260 reinstate annotation auto-id-width for wrapped... commit | commitdiff | tree | snapshot
2023-11-01 Ben SoaresJAL-4059 Add the newest exampleFile_2_7.jar to the... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-4260 fix up click/drags on ruler area in wrapped... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 simpler reimplementation of StringUtils.separa... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 Actually fix the order of js lib syncs to... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 upgraded Jmol commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-4260 right align the annotation labels regardless... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-244 noticed NPE exception was possible when visibil... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-244 knock on - make sure alignPanel is laid out... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4319 Downgrade shadow(Jar) module to stop triggerin... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 Just keeping these jsmol versions handy. ... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 If we upgrade Jsmol, do we want to upgrade... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 Converting Pattern/Matcher methods that are... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 rename jsmol zip file for clarity commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4059 ensure order of transferring JS lib zip files... commit | commitdiff | tree | snapshot
2023-10-30 James ProcterJAL-4317 enable display of feature when showing its... patch/JAL-4317_enablefeaturewhenadjustingstyle commit | commitdiff | tree | snapshot
2023-10-30 James ProcterHandle feature settings files loaded via drag and drop... feature/JAL-4315_fc_draganddrop commit | commitdiff | tree | snapshot
2023-10-30 James ProcterJAL-4315 allow feature settings to be loaded from a... commit | commitdiff | tree | snapshot
2023-10-30 James ProcterJAL-4315 identify feature settings file from its xml... commit | commitdiff | tree | snapshot
2023-10-26 Ben SoaresJAL-4059 Now using "Google Chrome for Testing" https... commit | commitdiff | tree | snapshot
2023-10-26 James ProcterMerge branch 'patch/JAL-4311_import_pLDDT_scores_from_n... commit | commitdiff | tree | snapshot
2023-10-26 James ProcterMerge branch 'bug/JAL-4313_cme_in_tests' into patch... commit | commitdiff | tree | snapshot
2023-10-25 Ben SoaresMerge branch 'develop' into bug/JAL-4289_group_boundary... bug/JAL-4289_group_boundary_not_drawn_properly_in_fastpaint_or_paint commit | commitdiff | tree | snapshot
2023-10-25 James ProcterJAL-4312 defend against ConcurrentModificationException bug/JAL-4313_cme_in_tests commit | commitdiff | tree | snapshot
2023-10-25 James ProcterJAL-4312 call AlignFrame.setAnnotationsVisibility on... commit | commitdiff | tree | snapshot
2023-10-24 Ben SoaresJAL-4059 Updated jmoljs and _j2sclasslist.txt commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4311 fix ranking so models with like scores are... improvement/JAL-4124_dont_duplacate_PAE_data_acrossviews commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4311 failing test case for 3d-beacons epas1_human... commit | commitdiff | tree | snapshot
2023-10-23 Ben SoaresMerge branch 'develop' into bug/JAL-4059_update_swingJS... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4310 let the user know when model pages are not... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterMerge branch 'develop' into improvement/JAL-4124_dont_d... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4090 release weds 25th Oct 23 - JAL-4308 release... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterMerge branch 'feature/JAL-4307_hetatm_showhide' into... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterMerge branch 'improvement/JAL-4308_smalleridtooltip... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4090 defensive check for featureSettings redraws... improvement/JAL-4308_smalleridtooltip commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4308 reduce number of refs to 5, always have canoni... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterJAL-4153 avoid use of invokeAndWait, increase wait... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterJAL-1551 errant tab and import commit | commitdiff | tree | snapshot
2023-10-22 James ProcterMerge branch 'patch/JAL-4298_synchronize_consoledoc... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterMerge branch 'improvement/JAL-3783_upgrade_to_groovy... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterMerge branch 'jims/bug/JAL-4298_java_console_causing_ha... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterMerge branch 'develop' into improvement/JAL-3783_upgrad... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterMerge branch 'jims/bug/JAL-4298_java_console_causing_ha... commit | commitdiff | tree | snapshot
2023-10-22 James ProcterJAL-4090 update docs for changed gradle -P options... commit | commitdiff | tree | snapshot
2023-10-21 James ProcterJAL-1332 JAL-4298 JAL-3772 rejig the quit handler so... jims/bug/JAL-4298_java_console_causing_hang_at_startup commit | commitdiff | tree | snapshot
2023-10-21 James ProcterMerge branch 'patch/JAL-4110_stdout_for_tests' into... commit | commitdiff | tree | snapshot
2023-10-21 James ProcterJAL-4110 allow configuration of stdout/err test output... patch/JAL-4110_stdout_for_tests commit | commitdiff | tree | snapshot
2023-10-21 James ProcterMerge branch 'develop' into patch/JAL-4110_stdout_for_tests commit | commitdiff | tree | snapshot
2023-10-20 Ben SoaresJAL-4298 Update help docs to reflect Groovy changes improvement/JAL-3783_upgrade_to_groovy-4 commit | commitdiff | tree | snapshot
2023-10-20 James ProcterMerge branch 'improvement/JAL-3783_upgrade_to_groovy... commit | commitdiff | tree | snapshot
2023-10-20 Ben SoaresJAL-4298 Remove a stray return in the processGroovyScri... commit | commitdiff | tree | snapshot
2023-10-20 James ProcterJAL-4298 reuse existing log level preference method commit | commitdiff | tree | snapshot
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