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jalview.git
2018-03-02 Jim ProcterJAL-2909 add sequence feature for quality commit | commitdiff | tree | snapshot
2018-03-02 Jim ProcterJAL-2909 add sequence feature for insertions commit | commitdiff | tree | snapshot
2018-03-01 kiramtJAL-2909 Updated tests feature/JAL-2909bamfiles commit | commitdiff | tree | snapshot
2018-03-01 kiramtJAL-2909 fixed another insertions bug commit | commitdiff | tree | snapshot
2018-02-28 kiramtJAL-2909 Fixed a bug in the insertions code commit | commitdiff | tree | snapshot
2018-02-28 kiramtJAL-2909 Gaps at start of reads only from start of... commit | commitdiff | tree | snapshot
2018-02-28 kiramtJAL-2909 Wire up coordinates dialog with bam file reader commit | commitdiff | tree | snapshot
2018-02-27 kiramtJAL-2909 Tidy up bam file cigar code commit | commitdiff | tree | snapshot
2018-02-26 kiramtJAL-2909 Bam file parsing with insertions, first pass commit | commitdiff | tree | snapshot
2018-02-26 kiramtJAL-2909 Changes to htsjdk import control commit | commitdiff | tree | snapshot
2018-02-26 kiramtJAL-2909 Cigar parsing tests commit | commitdiff | tree | snapshot
2018-02-21 kiramtJAL-2909 Partial insertions commit | commitdiff | tree | snapshot
2018-02-20 kiramtJAL-2909 Modified classpath commit | commitdiff | tree | snapshot
2018-02-20 kiramtJAL-2909 Insertions almost commit | commitdiff | tree | snapshot
2018-02-19 kiramtJAL-2909 Read in a bam file - but strand/location unaware commit | commitdiff | tree | snapshot
2018-02-19 kiramtJAL-2909 Removed buggy CIGAR parsing code which was... commit | commitdiff | tree | snapshot
2018-01-24 Jim ProcterJAL-2858 update release date and rejig what's new message commit | commitdiff | tree | snapshot
2018-01-23 Jim ProcterJAL-2858 fix what's new commit | commitdiff | tree | snapshot
2018-01-23 Jim ProcterJAL-2858 update latest release notes link in TOC commit | commitdiff | tree | snapshot
2018-01-23 Jim ProcterJAL-2859 release notes commit | commitdiff | tree | snapshot
2018-01-23 Jim ProcterJAL-2858 update release notes commit | commitdiff | tree | snapshot
2018-01-22 Jim ProcterJAL-2858 release notes for 2.10.3b1 (including revision... commit | commitdiff | tree | snapshot
2018-01-22 Jim ProcterJAL-2858 bump version number for 2.10.3b1 commit | commitdiff | tree | snapshot
2018-01-18 gmungocJAL-2810 JAL-2886 i18n commit | commitdiff | tree | snapshot
2018-01-18 gmungocJAL-2679 update query id to actual case of retrieved... commit | commitdiff | tree | snapshot
2018-01-17 gmungocJAL-2679 case-insensitive comparison of query and retri... commit | commitdiff | tree | snapshot
2018-01-16 gmungocJAL-2679 use object_type=Transcript for lookup of Paren... commit | commitdiff | tree | snapshot
2018-01-12 kiramtJAL-2886 trivial unit test fix commit | commitdiff | tree | snapshot
2018-01-11 kiramtMerge remote-tracking branch 'origin/task/JAL-2662... commit | commitdiff | tree | snapshot
2018-01-11 kiramtJAL-2662 Updated README task/JAL-2662 commit | commitdiff | tree | snapshot
2017-11-30 Jim ProcterJAL-2849 release notes commit | commitdiff | tree | snapshot
2017-11-30 Jim ProcterMerge branch 'bug/JAL-2849' into develop commit | commitdiff | tree | snapshot
2017-11-30 Jim ProcterJAL-2849 JAL-2863 file format preferences TODO
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2017-11-30 Jim ProcterJAL-2849 fix commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2859_uniprottowrongpdbid' into... commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterJAL-2740 release notes commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2740' into develop commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterJAL-2827 release notes commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2827' into develop commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterJAL-2842 release notes commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2842' into develop commit | commitdiff | tree | snapshot
2017-11-27 Jim ProcterJAL-2859 disambiguate with PDB ID if no file path bug/JAL-2859_uniprottowrongpdbid commit | commitdiff | tree | snapshot
2017-11-27 Jim ProcterJAL-2859 failing test demonstrating sequences with... commit | commitdiff | tree | snapshot
2017-11-27 Jim ProcterJAL-2851 JAL-2858 release notes for 2.10.3b1 commit | commitdiff | tree | snapshot
2017-11-27 Jim ProcterMerge branch 'bug/JAL-2851' into develop commit | commitdiff | tree | snapshot
2017-11-23 kiramtMerge branch 'develop' into bug/JAL-2851 bug/JAL-2851 commit | commitdiff | tree | snapshot
2017-11-23 kiramtJAL-2851 Fix merge error breaking vertical scrolling commit | commitdiff | tree | snapshot
2017-11-20 Jim ProcterJAL-2698 only allow InstallAnywhere launches with versi... commit | commitdiff | tree | snapshot
2017-11-20 Jim ProcterJAL-2698 patch path for InstallAnywhere build. Webstart... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 tidy release notes and whats new commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 source code licencing commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 tidy up release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 Cached PDB Entries -> Cached Structures in... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2466 revised help text for sort by PID commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 what’s new and release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2822 known defect for 2.10.3 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2784' into develop commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2841 JAL-2791 new known defect

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2017-11-17 Jim ProcterJAL-2541 known defect commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2684 clarify release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2821' into develop commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2840 release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2837' into develop commit | commitdiff | tree | snapshot
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 bug/JAL-2837 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'doc/JAL-2494_JAL-2828_mergefindAnnotation... commit | commitdiff | tree | snapshot
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2811 release note commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2541 not in 2.10.3, JAL-2831 signed off. commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 11th hour release today commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop commit | commitdiff | tree | snapshot
2017-11-16 Jim ProcterJAL-2541 JAL-2829 JAL-2830 JAL-2822 catch all release... commit | commitdiff | tree | snapshot
2017-11-16 Jim ProcterMerge branch 'bug/JAL-2829deleteCharsWithGaps' into... commit | commitdiff | tree | snapshot
2017-11-16 kiramtJAL-2831 Removed unwanted hidden sequences checks bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-16 kiramtJAL-2842 remove infinite loop in cursor move bug/JAL-2842 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2831 Don't show cursor if position in hidden region commit | commitdiff | tree | snapshot
2017-11-15 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2811 Updated following review bug/JAL-2811 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at... commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2834 JAL-2836 temporarily disabled wrapped mode... commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2831 ported to applet commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 tidies and tests commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 tidy commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Changed to overlay on via graphics context... commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Missed commit commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Made it work for hidden columns/seqs too commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 Attempt at cursor fix for wrapped mode commit | commitdiff | tree | snapshot
2017-11-14 Jim ProcterJAL-2758 update uniprot retrieval test commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 deal with hidden cols and seqs in new cursor... commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 Added move viewport event and set up cursor... commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2758 release notes commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2698 formatting commit | commitdiff | tree | snapshot
2017-11-13 kiramtJAL-2811 Tidy commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterMerge branch 'features/JAL-2758_shorteruniprot' into... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2758 remove configurable behaviour - Uniprot sequen... commit | commitdiff | tree | snapshot
2017-11-13 Jim ProcterJAL-2758 typo commit | commitdiff | tree | snapshot
2017-11-13 kiramtJAl-2811 Working for wrapped panels too commit | commitdiff | tree | snapshot
2017-11-13 gmungocJAL-2662 tweak README, format code commit | commitdiff | tree | snapshot
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