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jalview.git
2022-05-12 Ben SoaresJAL-4014 4 gecos colour schemes added to help documentation improvement/JAL-4014_gecos_colour_schemes commit | commitdiff | tree | snapshot
2022-05-12 Ben SoaresJAL-4014 4 gecos colour schemes added commit | commitdiff | tree | snapshot
2022-05-11 Jim ProcterMerge branch 'patch/JAL-4008_jabaws_2_2_1_patch' into... commit | commitdiff | tree | snapshot
2022-05-11 Jim ProcterJAL-4012 JAL-4008 release notes for Jalview 2.11.2.3 commit | commitdiff | tree | snapshot
2022-05-10 Jim ProcterJAL-4008 update jabaws client to 2.2.1 - definitely... patch/JAL-4008_jabaws_2_2_1_patch commit | commitdiff | tree | snapshot
2022-05-10 Jalview Development... Merge branch 'releases/Release_2_11_2_Branch' Release_2_11_2_2 commit | commitdiff | tree | snapshot
2022-05-10 Ben SoaresJAL-4004 cosmetic improvements for Java documentation... commit | commitdiff | tree | snapshot
2022-05-09 Ben SoaresJAL-4004 gradle task releasesTemplates now part of... commit | commitdiff | tree | snapshot
2022-05-09 Ben SoaresJAL-4004 working templates and generated whatsNew.html... commit | commitdiff | tree | snapshot
2022-05-09 Ben SoaresJAL-4004 remove stray empty h3 headers commit | commitdiff | tree | snapshot
2022-05-09 Ben SoaresJAL-4004 gradle releasesTemplates builds releases.html commit | commitdiff | tree | snapshot
2022-05-09 Ben SoaresJAL-4004 Temporary mechanism to add JalviewJS link... commit | commitdiff | tree | snapshot
2022-05-09 Ben SoaresJAL-3989 Code tidying, added JVL_HEADER for older versi... commit | commitdiff | tree | snapshot
2022-05-05 Ben SoaresJAL-4004 Now generating hugo files from help/markdown/... commit | commitdiff | tree | snapshot
2022-05-04 Ben SoaresJAL-4004 existing releases-VERSION.md files and release... commit | commitdiff | tree | snapshot
2022-05-04 Ben SoaresJAL-4004 locations for markdown to go into whatsnew... commit | commitdiff | tree | snapshot
2022-05-03 Ben SoaresJAL-3989 improved parsing and formatting now using... commit | commitdiff | tree | snapshot
2022-05-03 Ben SoaresJAL-1544 minor errors in releases.html and one missing... commit | commitdiff | tree | snapshot
2022-04-29 Ben SoaresJAL-3989 small improvements to output markdown commit | commitdiff | tree | snapshot
2022-04-28 Ben SoaresJAL-3989 add in issue shortcodes to the archive version... commit | commitdiff | tree | snapshot
2022-04-27 Ben SoaresJAL-1544 version number typo, probably copy and paste commit | commitdiff | tree | snapshot
2022-04-27 Ben SoaresJAL-3989 Populate template files for hugo build: archiv... commit | commitdiff | tree | snapshot
2022-04-26 Mateusz WarownyJAL-3878 Implement RNA Sec. Str. Pred. discovery for... JAL-3878_ws-overhaul-3 commit | commitdiff | tree | snapshot
2022-04-25 Ben SoaresJAL-3989 moved getdown build dirs to build/website... commit | commitdiff | tree | snapshot
2022-04-25 Ben SoaresJAL-3989 Independent creation of JSON installer sections commit | commitdiff | tree | snapshot
2022-04-25 Mateusz WarownyJAL-3878 log full worker repr in AlignCalcManager commit | commitdiff | tree | snapshot
2022-04-25 Mateusz WarownyJAL-3878 Fix edit settings dialog prompting to discard... commit | commitdiff | tree | snapshot
2022-04-25 Ben SoaresJAL-3978 clean up unnecessary local variables for JALVI... commit | commitdiff | tree | snapshot
2022-04-22 Ben SoaresJAL-3989 Changed to using com.google.common.hash for... commit | commitdiff | tree | snapshot
2022-04-21 Ben SoaresMerge branch 'develop' into merge/JAL-3978+JAL-3553... commit | commitdiff | tree | snapshot
2022-04-21 Ben SoaresMerge branch 'develop' into task/JAL-3991_check_actual_... commit | commitdiff | tree | snapshot
2022-04-19 Jim ProcterMerge branch 'develop' into releases/Release_2_11_2_Branch commit | commitdiff | tree | snapshot
2022-04-19 Jim ProcterJAL-3992 bump version and report updates in 2.11.2... commit | commitdiff | tree | snapshot
2022-04-19 Jim ProcterMerge branch 'bug/JAL-3997_NPE_in_wrapped_mode' into... commit | commitdiff | tree | snapshot
2022-04-19 Jim ProcterMerge branch 'bug/JAL-3365_extendedDSSP_via_stockholm... commit | commitdiff | tree | snapshot
2022-04-18 Jim ProcterJAL-3997 check for tooltip being null before checking... bug/JAL-3997_NPE_in_wrapped_mode commit | commitdiff | tree | snapshot
2022-04-18 Jim ProcterMerge branch 'task/JAL-3992_update_docs' into bug/JAL... bug/JAL-3365_extendedDSSP_via_stockholm commit | commitdiff | tree | snapshot
2022-04-18 Jim ProcterJAL-3992 fix path commit | commitdiff | tree | snapshot
2022-04-16 Jim ProcterJAL-3365 expand range of allowed DSSP secondary structu... commit | commitdiff | tree | snapshot
2022-04-13 Jim ProcterJAL-3992 shift+arrow to jump to next gap/residue in... commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Use slivka client's URL when building web... commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Add conservation service discovery commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Build interactive services menu commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Implement prot. seq. an. discovery for slivka. commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Implement gui elements for annotation servicces commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Create SlivkaAnnotationWSClient commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Add full name getter to ActionI commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Log status changes in annotation task commit | commitdiff | tree | snapshot
2022-04-11 Mateusz WarownyJAL-3878 Allow null value for action name commit | commitdiff | tree | snapshot
2022-04-07 Mateusz WarownyJAL-3878 Add action and task for annotation services commit | commitdiff | tree | snapshot
2022-04-06 Ben SoaresJAL-3991 Made info displayed only when needed (Java... commit | commitdiff | tree | snapshot
2022-04-06 Ben SoaresJAL-3991 Added information output about the slightly... commit | commitdiff | tree | snapshot
2022-04-06 Ben SoaresJAL-3991 JAVA_COMPILE_VERSION put into build_properties... commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterMerge branch 'develop' into releases/Release_2_11_2_Branch commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterJAL-3990 release notes and what’s new Release_2_11_2_1 commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterMerge branch 'develop' into releases/Release_2_11_2_Branch commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterJAL-3981 patch tests and remove errant imports commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterMerge branch 'develop' into releases/Release_2_11_2_Branch commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterJAL-3990 gradle spotlessApply commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterJAL-3990 release notes for 2.11.2.1 patch release commit | commitdiff | tree | snapshot
2022-04-05 Jim ProcterMerge branch 'bug/JAL-3980_JAL-3981_tooltips_sequence_d... commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Introduce IProgressIndicator#addProgressBar commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Fix method name to fireTaskRestarted commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Add char[] constructor to Sequence commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Make BaseJob setters public so they can be... commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Add fullName to BaseAction class which combine... commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Move status precedence list to JobStatus class commit | commitdiff | tree | snapshot
2022-04-05 Mateusz WarownyJAL-3878 Add uid to WS Tasks commit | commitdiff | tree | snapshot
2022-04-05 Ben SoaresJAL-3989 slight refactor of build.gradle, add more... commit | commitdiff | tree | snapshot
2022-04-04 Ben SoaresJAL-3989 fix a build date once in build.gradle, not... commit | commitdiff | tree | snapshot
2022-03-31 Jim ProcterMerge branch 'develop' into releases/Release_2_11_2_Branch commit | commitdiff | tree | snapshot
2022-03-31 Jim ProcterJAL-3983 release note for JAL-3985 commit | commitdiff | tree | snapshot
2022-03-31 Jim ProcterMerge branch 'bug/JAL-3085_avoid_414_error_for_PDBFTS... commit | commitdiff | tree | snapshot
2022-03-31 Ben SoaresMerge branch 'task/JAL-3553_improved_install4j_output_t... commit | commitdiff | tree | snapshot
2022-03-31 Ben SoaresMerge branch 'develop' into improvement/JAL-3978_add_gr... commit | commitdiff | tree | snapshot
2022-03-31 Jim ProcterJAL-3085 update tests and mock responses, new P0dtd1... commit | commitdiff | tree | snapshot
2022-03-31 Jim ProcterJAL-3985 formatting commit | commitdiff | tree | snapshot
2022-03-31 Jim ProcterJAL-3985 split PDB id queries into multiple queries... commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterMerge branch 'patch/JAL-3976_3dbeaconsnull' into develop commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-3976 fix mock PDBFTS query & responses patch/JAL-3976_3dbeaconsnull commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-3983 known issue note for JAL-3984 commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-3983 release notes for JAL-3975 and known issue... commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterMerge branch 'bug/JAL-360+JAL-3975_keyboard_input_lost_... commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-360 JAL-3975 update parent for text colour dialog... commit | commitdiff | tree | snapshot
2022-03-30 Ben SoaresJAL-360 JAL-3975 make AlignFrame the parent of FeatureE... commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-3983 update release notes for JAL-3973 commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-3973 exclude the original RELEASE file so gradle... commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterMerge branch 'bug/JAL-3973_source_tarball_not_building... commit | commitdiff | tree | snapshot
2022-03-30 Jim ProcterJAL-3983 release 2.11.2.1 date and release notes commit | commitdiff | tree | snapshot
2022-03-28 Mateusz WarownyJAL-3878 Patch preferences window to use new discoverer. commit | commitdiff | tree | snapshot
2022-03-28 Mateusz WarownyJAL-3878 Fix discoverer being stuck on BEGIN state... commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Add slivka discoverer and menu to AlignFrame commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Change align frame added to desktop to correct one commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Wrap infoPanel updates with SwingUtilities... commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Fix re-alignment-capable services detection. commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Clear services list on reload. commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Fix task status precedence calculation commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Fix NullPointerExceptions caused by nulls... commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL3878 Implement slivka service discoverer commit | commitdiff | tree | snapshot
2022-03-25 Mateusz WarownyJAL-3878 Move action name initialization to its own... commit | commitdiff | tree | snapshot
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