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jalview.git
2015-09-01 Jim ProcterMerge branch 'bug/JAL-1853_gapchar_output' into develop commit | commitdiff | tree | snapshot
2015-09-01 Jim ProcterJAL-1853 add test to Functional group commit | commitdiff | tree | snapshot
2015-09-01 Jim ProcterJAL-1853 make getVisibleSeqs more memory efficient... commit | commitdiff | tree | snapshot
2015-09-01 Jim ProcterJAL-1853 refactor clip routine from getSequenceStrings commit | commitdiff | tree | snapshot
2015-09-01 Jim Procterpatch for JAL-1853 - use given gap character to reconst... commit | commitdiff | tree | snapshot
2015-09-01 Jim ProcterJAL-1853 test origin of gapChar bug in AlignView method commit | commitdiff | tree | snapshot
2015-09-01 Jim ProcterJAL-1853 test demonstrating bug commit | commitdiff | tree | snapshot
2015-09-01 tcofoegbuJAL-1668 house keeping commit | commitdiff | tree | snapshot
2015-08-31 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-31 tcofoegbuJAL-1700 updated error handling with suggested improvem... commit | commitdiff | tree | snapshot
2015-08-28 gmungocJAL-1836 temporary workaround for negative resNumIns... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1270 comments added regarding required remote service commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1759 updated unit test for removal of trim on Atom... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1830 tests relocated to AlignViewportTest after... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1627 updated expected tooltip text in unit test commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1830 unit tests for removing (or not) mappings... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1830 refactored so no jalview.gui references from... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-845 compacting duplicated code commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1611 debug sysout suppressed commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1544 message label corrected commit | commitdiff | tree | snapshot
2015-08-27 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1701 help page for Split Frame view linked in commit | commitdiff | tree | snapshot
2015-08-27 Jim ProcterJAL-1844 adding more missing jars - jersey, other json... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1544 'Jalview' consistently capitalised commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-892 JAL-1764 Varna and Chimera also saved to projec... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-892 saved to project; external help link updated commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1727 added EBI mirror of DAS registry commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1596 JAL-1725 JAL-1588 updates for selection in... commit | commitdiff | tree | snapshot
2015-08-27 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-27 gmungocJAL-1725 restrict Jalview's Jetty server to localhost commit | commitdiff | tree | snapshot
2015-08-27 Jim Procterfix for JAL-1844 add jersey-core,json,client-1.19 to... commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1830 dropped reference counts for mappings, instead... commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1596 check for null pointer (thread running after... commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1270 test separated out of JalviewChimeraView commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1270 corrected path to test properties file commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1270 separated Jmol and Chimera tests to avoid... commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1759 updated unit test for removal of trim of Atom... commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1840 correct setting status bar for structure mouseover commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1759 added check for null (console 'history') commit | commitdiff | tree | snapshot
2015-08-26 gmungocFix to use correct resource bundle entry commit | commitdiff | tree | snapshot
2015-08-26 gmungocJAL-1759 corrected syntax for 'atom picked' callback... commit | commitdiff | tree | snapshot
2015-08-25 gmungocJAL-1780 just a spelling change commit | commitdiff | tree | snapshot
2015-08-25 gmungocJAL-1674 more correct status bars in splitframe mouseov... commit | commitdiff | tree | snapshot
2015-08-24 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-24 gmungocJAL-1759 removed trim() of Atom.resNumIns as not backwa... commit | commitdiff | tree | snapshot
2015-08-24 tcofoegbuJAL-1641 externalised save_as_biojs_html commit | commitdiff | tree | snapshot
2015-08-24 tcofoegbuJAL-1835 corrected Embbed to Embed commit | commitdiff | tree | snapshot
2015-08-24 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-24 tcofoegbuJAL-1834 removed quotes around truncated strings with... commit | commitdiff | tree | snapshot
2015-08-24 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-24 gmungocJAL-845 error message on syserr if supplied files don... commit | commitdiff | tree | snapshot
2015-08-24 gmungocremove mentions of non-functional RNAInteraction colour... commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuJAL-1834 capped the tool-tip text at 500. once that... commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuJAL-1834 disabled action buttons (Back / Ok / Cancel... commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuJAL-1443 bug fix for loading pasted alignments from... commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuJAL-1831 updated json schema doc commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuclean up commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuJAL-1780 made the 'Select All' checkbox to be shown... commit | commitdiff | tree | snapshot
2015-08-21 tcofoegbuJAL-1780 changed 'Check All' to 'Select All' and extern... commit | commitdiff | tree | snapshot
2015-08-20 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-20 tcofoegbuJAL-1833 revised implementation commit | commitdiff | tree | snapshot
2015-08-20 gmungocJAL-1833 added unit tests (some failing) for wrapToolitp commit | commitdiff | tree | snapshot
2015-08-19 gmungocJAL-1782 don't save TESTNG output summary to git commit | commitdiff | tree | snapshot
2015-08-19 gmungocJAL-1725 log to sysout when listener shuts down commit | commitdiff | tree | snapshot
2015-08-19 gmungocJAL-1742 suppress 'add chain' option for Jmol, pull... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1861 bugfix to allow parsing of stockholm files... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1835 added UI for BioJSON embbeding preference commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1835 made BioJSON embedding to html exports configu... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1834 added tooltip to the PDB sequence fetcher... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1833 modified tooltip to force wraping of long... commit | commitdiff | tree | snapshot
2015-08-17 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1800 separated SearchResults.getCharacters() from... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1270 testIsMappable added commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1805 corrected javadoc only commit | commitdiff | tree | snapshot
2015-08-17 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-17 tcofoegbuJAL-1832 improvement to enable result update only when... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1829 JAL-1830 refactoring for correct mapping ... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1800 smarter matching when following mouseover... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1691 scan full width and depth of alignment for... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1800 SearchResults.equals() to allow smarter mouseo... commit | commitdiff | tree | snapshot
2015-08-17 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1551 updated to reflect changes to Eclipse preferen... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1551 properties sorted (unchanged) for ease of... commit | commitdiff | tree | snapshot
2015-08-17 tcofoegbuJAL-1831 update all maxItems annotation to the max... commit | commitdiff | tree | snapshot
2015-08-14 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-14 tcofoegbuJAL-1831 added changes to allow auto-generation of... commit | commitdiff | tree | snapshot
2015-08-13 tcofoegbuJAL-1826 bug fix to select pdb sequence fetcher via... commit | commitdiff | tree | snapshot
2015-08-13 tcofoegbuJAL-1641 added type to BioJSON sequence object and... commit | commitdiff | tree | snapshot
2015-08-11 tcofoegbuJAL-1641 updated json help doc commit | commitdiff | tree | snapshot
2015-08-11 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-11 tcofoegbuadd ability to launch jalview from exported html +... commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterJAL-1645 updated final release date for version 2.9 commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterMerge branch 'release/2_9_documentation' into develop commit | commitdiff | tree | snapshot
2015-08-10 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-10 gmungocJAL-1516 indent multiple annotation parameters on new... commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterJAL-736 relocate group associated conservation symbols... commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterJAL-736 source formatting commit | commitdiff | tree | snapshot
2015-08-10 tcofoegbuJAL-1486 fixed flatfile output of visible region for... commit | commitdiff | tree | snapshot
2015-08-07 tcofoegbuJAL-1824 updated caching procedure for pdb entries... commit | commitdiff | tree | snapshot
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