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jalview.git
2023-12-12 Ben SoaresJAL-4353 helper method and test for primary/secondary... commit | commitdiff | tree | snapshot
2023-12-06 Ben SoaresJAL-4353 re-used random color code commit | commitdiff | tree | snapshot
2023-12-06 Ben SoaresJAL-4353 Preserve the user given 'linkedId' with ArgVal... commit | commitdiff | tree | snapshot
2023-12-06 Ben SoaresJAL-4353 Add a 'random' colour to produce a random... commit | commitdiff | tree | snapshot
2023-12-05 Ben SoaresJAL-4353 Add secondary Types for Args, for STRUCTUREIMA... commit | commitdiff | tree | snapshot
2023-12-01 Ben SoaresJAL-4243 Updated bio.tools record and JSON (version... commit | commitdiff | tree | snapshot
2023-11-30 James ProcterJAL-4351 update release notes for JAL-4342 commit | commitdiff | tree | snapshot
2023-11-30 James ProcterMerge branch 'patch/JAL-4342_emptyannotationsexport... commit | commitdiff | tree | snapshot
2023-11-30 James ProcterJAL-4342 test and patch checking annotation csv export... patch/JAL-4342_emptyannotationsexport commit | commitdiff | tree | snapshot
2023-11-30 James ProcterPatch fixes JAL-4165 - added to release notes JAL-4351 commit | commitdiff | tree | snapshot
2023-11-30 James ProcterJAL-4351 2.11.3.2 scheduled for 1st December release commit | commitdiff | tree | snapshot
2023-11-30 James ProcterMerge branch 'bug/JAL-4344_structureimage_cl_arg_only_c... commit | commitdiff | tree | snapshot
2023-11-30 Ben SoaresJAL-4344 careful application of -Djava.awt.headless... commit | commitdiff | tree | snapshot
2023-11-22 James ProcterJAL-4343 fix insufficient-caffeine error - add whats... commit | commitdiff | tree | snapshot
2023-11-22 James ProcterJAL-4343 release today, update notes for JAL-4348 and... commit | commitdiff | tree | snapshot
2023-11-22 James ProcterMerge branch 'patch/JAL-4345_pae_epas1_doubleclick... commit | commitdiff | tree | snapshot
2023-11-21 James ProcterJAL-4345 patch and release notes patch/JAL-4345_pae_epas1_doubleclick commit | commitdiff | tree | snapshot
2023-11-20 Ben SoaresJAL-4348 Add newer versions of Chimera and ChimeraX... commit | commitdiff | tree | snapshot
2023-11-20 James ProcterJAL-4343 patch for JAL-4347 uniprot non-pos feature... commit | commitdiff | tree | snapshot
2023-11-17 James ProcterJAL-4343 release notes for JAL-4340 and JAL-4243 commit | commitdiff | tree | snapshot
2023-11-17 James ProcterJAL-4343 bump version commit | commitdiff | tree | snapshot
2023-11-16 Ben SoaresJAL-4243 Updated bio.tools record for 2.11.3.0 commit | commitdiff | tree | snapshot
2023-11-16 Ben SoaresJAL-4340 Change launch scripts to be xresources to... commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 JAL-4334 patch in release notes commit | commitdiff | tree | snapshot
2023-11-15 James ProcterMerge branch 'bug/JAL-4334_unknownstartenduniprotfeatur... commit | commitdiff | tree | snapshot
2023-11-15 James ProcterMerge branch 'patch/JAL-4222_100s_timeout_on_imagexport... commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4273 actually pass startSeq etc on to rendering... commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 fix up release notes new known issues commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4222 bail if we wait too long for Jmol to save... patch/JAL-4222_100s_timeout_on_imagexport commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 blocker patch JAL-3772 tidy up groovy console... commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 JAL-4334 position status when start, end or... bug/JAL-4334_unknownstartenduniprotfeatures commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 JAL-4338 known defect commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 release 15th November 2023 commit | commitdiff | tree | snapshot
2023-11-15 James ProcterJAL-4090 JAL-3858 fix up PAE docs - drop the EBI image... commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4090 JAL-1551 source license commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4090 relese date 14th Nov 2023 commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4236 don’t look for headers in JalviewJS commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4336 set preferred dimensions for JTextBox workarou... commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4090 fix JAL-4236 - just put the name of the class... commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4331 construct and pass on overview title before... commit | commitdiff | tree | snapshot
2023-11-13 James ProcterJAL-4334 failing test using whole of Q29079 accession... commit | commitdiff | tree | snapshot
2023-11-09 Ben SoaresJAL-4090 minor missing word correction to whatsnew commit | commitdiff | tree | snapshot
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff | tree | snapshot
2023-11-03 James ProcterJAL-4090 tweak what’s new commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 reported new known issue JAL-4328 commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4192 minimal specification of gradle version in... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 fix up release notes - add notes or JAL-4216... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4169 fix up urls to faq and documentation commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 known issue report for JAL-4517 commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 release notes for JAL-1713 JAL-2528 and known... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-3921 release notes commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'patch/JAL-3921_jmol_session_save' into... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3921_jmol_session... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4217 wrap progress bar creation in an invokeLater... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-3088 release notes JAL-4090 commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-1551 formatting commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'patch/JAL-3088_finalbracenotinrightplace... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3088_finalbraceno... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 update release date to friday 3rd November commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4293 JAL-4325 release notes commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4218 patch and release notes - don’t inclu... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 marked JAL-4290 as a knowndefect commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4110 JAL-3599 release notes commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4310 JAL-4298 JAL-4282 JAL-4223 release... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 JAL-4147 documentation for revised sequence... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4090 release notes for JAL-4304,JAL-4305 and JAL... commit | commitdiff | tree | snapshot
2023-11-02 James ProcterJAL-4289 JAL-4253 lower end of group boundary vertical... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4090 JAL-4281 JAL-4311 release notes commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'patch/JAL-4281_idwidthandannotHeight_in_p... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4281 patch test so it passes on build server and... patch/JAL-4281_idwidthandannotHeight_in_project commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4090 release notes for JAL-4315 commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'feature/JAL-4315_fc_draganddrop' into... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4090 JAL-4317 release notes commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'patch/JAL-4317_enablefeaturewhenadjusting... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'develop' into patch/JAL-4281_idwidthandan... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterMerge branch 'patch/JAL-4260_fix_up_select_via_ruler_in... commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4260 encapsulate logic for resolving nearest column... patch/JAL-4260_fix_up_select_via_ruler_in_wrapped commit | commitdiff | tree | snapshot
2023-11-01 James ProcterJAL-4260 reinstate annotation auto-id-width for wrapped... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-4260 fix up click/drags on ruler area in wrapped... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-4260 right align the annotation labels regardless... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-244 noticed NPE exception was possible when visibil... commit | commitdiff | tree | snapshot
2023-10-31 James ProcterJAL-244 knock on - make sure alignPanel is laid out... commit | commitdiff | tree | snapshot
2023-10-31 Ben SoaresJAL-4319 Downgrade shadow(Jar) module to stop triggerin... commit | commitdiff | tree | snapshot
2023-10-30 James ProcterJAL-4317 enable display of feature when showing its... patch/JAL-4317_enablefeaturewhenadjustingstyle commit | commitdiff | tree | snapshot
2023-10-30 James ProcterHandle feature settings files loaded via drag and drop... feature/JAL-4315_fc_draganddrop commit | commitdiff | tree | snapshot
2023-10-30 James ProcterJAL-4315 allow feature settings to be loaded from a... commit | commitdiff | tree | snapshot
2023-10-30 James ProcterJAL-4315 identify feature settings file from its xml... commit | commitdiff | tree | snapshot
2023-10-26 James ProcterMerge branch 'patch/JAL-4311_import_pLDDT_scores_from_n... commit | commitdiff | tree | snapshot
2023-10-26 James ProcterMerge branch 'bug/JAL-4313_cme_in_tests' into patch... commit | commitdiff | tree | snapshot
2023-10-25 Ben SoaresMerge branch 'develop' into bug/JAL-4289_group_boundary... bug/JAL-4289_group_boundary_not_drawn_properly_in_fastpaint_or_paint commit | commitdiff | tree | snapshot
2023-10-25 James ProcterJAL-4312 defend against ConcurrentModificationException bug/JAL-4313_cme_in_tests commit | commitdiff | tree | snapshot
2023-10-25 James ProcterJAL-4312 call AlignFrame.setAnnotationsVisibility on... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4311 fix ranking so models with like scores are... improvement/JAL-4124_dont_duplacate_PAE_data_acrossviews commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4311 failing test case for 3d-beacons epas1_human... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4310 let the user know when model pages are not... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterMerge branch 'develop' into improvement/JAL-4124_dont_d... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4090 release weds 25th Oct 23 - JAL-4308 release... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterMerge branch 'feature/JAL-4307_hetatm_showhide' into... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterMerge branch 'improvement/JAL-4308_smalleridtooltip... commit | commitdiff | tree | snapshot
2023-10-23 James ProcterJAL-4090 defensive check for featureSettings redraws... improvement/JAL-4308_smalleridtooltip commit | commitdiff | tree | snapshot
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