2020-01-28 |
gmungoc | Merge branch 'feature/JAL-3121gffAttributeMap' into... |
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2020-01-28 |
gmungoc | JAL-3187 one more obsolete method removed |
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2020-01-24 |
Ben Soares | JAL-3394 Removed libjli.dylib symbolic link from embedd... |
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2020-01-24 |
Ben Soares | JAL-3394 Variable-ise output folders -- will work bette... |
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2020-01-24 |
gmungoc | JAL=3121 more data format validation/tests, help text... feature/JAL-3121gffAttributeMap |
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2020-01-23 |
Ben Soares | JAL-3130 removed a debug message from build.gradle |
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2020-01-23 |
gmungoc | JAL-3121 update help page for GFF column 9 nested attri... |
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2020-01-23 |
Ben Soares | JAL-3130 Improved locations of AdoptOpenJDK JRE downloa... |
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2020-01-23 |
gmungoc | JAL-3121 'attributes map' in GFF3 without special ... |
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2020-01-17 |
Ben Soares | JAL-3252 Don't add java_location until we've got a... |
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2020-01-17 |
Ben Soares | JAL-3447 Minor improvement on file association creation |
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2020-01-16 |
Jim Procter | Merge branch 'improvement/JAL-3449_add_install4j_instal... |
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2020-01-16 |
Jim Procter | JAL-3474 release notes |
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2020-01-16 |
Jim Procter | Merge branch 'improvement/JAL-3474_lots_of_.cvsignore_f... |
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2020-01-10 |
Ben Soares | JAL-3477 getdown jars. This commit can be left out... bug/JAL-3477_memory_max_allocation |
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2020-01-10 |
Ben Soares | JAL-3477 updated getdown's jalview.bin.MemorySetting |
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2020-01-10 |
Ben Soares | JAL-3477 Javadoc, addition of -jvmmempc and -jvmmemmax... |
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2020-01-09 |
Ben Soares | JAL-3477 getdown jars. This commit can be left out... |
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2020-01-09 |
Ben Soares | JAL-3477 Newer jalview.bin.MemorySetting jalview.bin... |
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2020-01-09 |
Ben Soares | JAL-3477 Refactoring based on CR-JAL-189 |
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2020-01-09 |
Ben Soares | JAL-3477 getdown jars. This commit can be left out... |
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2020-01-09 |
Ben Soares | JAL-3477 New jalview.bin.MemorySetting jalview.bin... |
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2020-01-09 |
Ben Soares | JAL-3477 Javadoc, refactoring and slight changes to... |
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2020-01-08 |
Ben Soares | JAL-3393 Improved background image, SVG file, and added... |
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2020-01-07 |
Ben Soares | JAL-3393 Improved background image, SVG file, and added... |
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2020-01-07 |
Ben Soares | JAL-3393 Improved background image, and generating... |
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2020-01-07 |
Ben Soares | JAL-3477 Fixed appbase override so it's optional\! |
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2020-01-07 |
Ben Soares | JAL-3477 Added appbase override option at buildtime... |
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2020-01-06 |
Ben Soares | JAL-3447 minor corrections to cif and mmcif file associ... |
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2019-12-30 |
Ben Soares | JAL-3394 catch a null pointer exception, when URI not... |
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2019-12-20 |
Ben Soares | JAL-3473 Checked value of def and min. Set def to min... |
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2019-12-18 |
Ben Soares | JAL-3394 Fixed jalviews?:// scheme for macOS startup |
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2019-12-17 |
Ben Soares | JAL-3394 Added a 'jalview://' and 'jalviews://' parser... |
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2019-12-17 |
Ben Soares | JAL-3449 correctly catch absence of install4j in getdow... |
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2019-12-16 |
Ben Soares | JAL-3449 don't assume install4j jar in classpath of... |
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2019-12-13 |
Ben Soares | JAL-3394 improvements to the file association progress bar |
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2019-12-12 |
Ben Soares | JAL-3394 jalviews scheme added |
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2019-12-12 |
Ben Soares | JAL-3394 file not needed |
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2019-12-12 |
Ben Soares | JAL-3447 Satisfactory file associations. cif, mcif... |
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2019-12-12 |
Ben Soares | JAL-3447 Change to install4j template version, JAL... |
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2019-12-12 |
Jim Procter | JAL-2305 moved failing CrossRef tests to Functional_Fai... |
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2019-12-12 |
Jim Procter | JAL-3407 update release date for Jalview 2.11.1 |
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2019-12-10 |
Ben Soares | JAL-3394 Simplified media output from install4j |
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2019-12-09 |
Ben Soares | JAL-3449 More whitespace in installer. Tidying |
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2019-12-09 |
Ben Soares | JAL-3449 Fixed Info.plist file insertion. Simplified... |
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2019-12-09 |
Ben Soares | JAL-3449 Now parsing install4j XML file to edit values... |
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2019-12-08 |
Ben Soares | JAL-3449 Work in progress improving XML replacements... |
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2019-12-06 |
Ben Soares | JAL-3394 disableSigning=true when DEV |
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2019-12-06 |
Ben Soares | JAL-3394 Changed most of the token replacement for... |
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2019-12-06 |
Ben Soares | JAL-3449 Added more versions to getdown splashscreen... |
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2019-11-23 |
Ben Soares | JAL-3420 multiple file extensions for the same mime... |
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2019-11-22 |
Ben Soares | JAL-3449 install4j version, install4j template version... |
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2019-11-22 |
Ben Soares | JAL-3477 merging in 3477 |
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2019-11-22 |
Ben Soares | JAL-3393 Improved background image for DMG finder windo... |
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2019-11-22 |
Ben Soares | JAL-3449 adding an installer template version. Really... |
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2019-11-21 |
Ben Soares | JAL-3449 added an install4j compiler var |
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2019-11-21 |
Ben Soares | JAL-3449 JAL-3394 merged on install4j8 template |
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2019-11-21 |
Ben Soares | Merge branch 'improvement/JAL-3393_DMG_Finder_window_im... |
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2019-11-21 |
Ben Soares | JAL-3449 Using .gitignore from Jalview-JS/develop |
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2019-11-21 |
Ben Soares | JAL-3449 Using tidied build.gradle and gradle.propertie... |
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2019-11-20 |
Ben Soares | JAL-3477 A bit of refactoring for the better |
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2019-11-20 |
Ben Soares | JAL-3210 cache getdown config, remove jvmmem options... |
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2019-11-19 |
Ben Soares | JAL-3210 removing overly complicated logging. Settling... |
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2019-11-18 |
Ben Soares | JAL-3477 New jvmmemmax config option in getdown and... |
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2019-11-18 |
Ben Soares | JAL-3477 New sensible default decisions on memory,... |
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2019-11-01 |
Ben Soares | JAL-3474 removed all .cvsignore files stored in the... improvement/JAL-3474_lots_of_.cvsignore_files |
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2019-11-01 |
gmungoc | JAL-3468 unit tests updated for changes |
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2019-10-31 |
gmungoc | JAL-3468 truncate feature description to 40 chars in... |
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2019-10-15 |
Jim Procter | JAL-3407 update release date for Jalview 2.11.1 |
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2019-10-11 |
Jim Procter | Merge branch 'develop' into documentation/JAL-3407_2... |
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2019-09-26 |
gmungoc | JAL-2481 remove code duplication left by merge |
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2019-09-26 |
gmungoc | JAL-3441 action double-click in Feature Type column... |
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2019-08-30 |
Ben Soares | JAL-3394 JAL-3420 Temporary measure limits unix file... task/JAL-3394_install4j8_option |
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2019-08-29 |
Ben Soares | JAL-3420 JAL-3424 Changed default JDK compile back... |
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2019-08-29 |
Ben Soares | JAL-3420 JAL-3394 Correct format of XML in added file... |
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2019-08-28 |
Ben Soares | JAL-3420 JAL-3394 Using install4j8 template with file... |
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2019-08-23 |
gmungoc | JAL-3141 correct cast of spinner value |
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2019-08-22 |
gmungoc | JAL-3121 slightly cleaner parsing of, and unit test... |
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2019-08-22 |
gmungoc | Merge branch 'develop' into feature/JAL-3121gffAttributeMap |
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2019-08-22 |
gmungoc | JAL-3187 case-insensitive codon variant calculation |
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2019-08-22 |
gmungoc | JAL-3121 round trip GFF attributes including map-valued... |
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2019-08-22 |
gmungoc | JAL-3187 one more obsolete method removed |
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2019-08-21 |
gmungoc | JAL-3187 minor code tidying, todo removal |
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2019-08-19 |
gmungoc | JAL-3412 calculateIdWidth - more consistency, constants... |
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2019-08-12 |
Jim Procter | JAL-2987 release notes |
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2019-08-12 |
Jim Procter | JAL-3407 update RELEASE and cut new release notes in... |
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2019-08-12 |
Jim Procter | JAL-3407 JAL-3406 update credits in Jalview 2.11.1 |
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2019-08-09 |
gmungoc | JAL-3187 removal of variant feature (non-virtual) trans... |
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2019-08-07 |
gmungoc | JAL-3187 (fudge) look in both alignments for stored... feature/JAL-3187linkedFeatures |
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2019-08-07 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures |
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2019-08-01 |
Ben Soares | JAL-3393 New DS_Store with slightly bigger Finder windo... improvement/JAL-3393_DMG_Finder_window_improvements |
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2019-07-31 |
gmungoc | JAL-3389 add .py to restored Chimera session filename... |
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2019-07-31 |
gmungoc | Merge branch 'bug/JAL-3388structureChooserSorting'... |
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2019-07-30 |
gmungoc | JAL-3198 more efficient Sequence.getDisplayId() |
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2019-07-30 |
gmungoc | JAL-3388 correct class for column 0 Ref Sequence bug/JAL-3388structureChooserSorting |
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2019-07-29 |
gmungoc | JAL-3386 correct wrapped width calculation for headless... |
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2019-07-29 |
gmungoc | JAL-3377 more reused of SeqCanvas.computeWrappedGeometry |
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2019-07-29 |
gmungoc | JAL-3377 add seq-annotations gap to cheight not to... |
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2019-07-29 |
gmungoc | JAL-3377 Javadoc added for getWrappedHeight() |
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2019-07-29 |
gmungoc | JAL-3377 corrected wrapped widths height for IdCanvas |
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