jalview.git
2017-10-07 kjvdheideRenaming
2017-10-06 kjvdheideStart of creating the objects Archaeopteryx needs
2017-10-05 kjvdheideMerge branch 'develop' of https://source.jalview.org...
2017-10-05 kjvdheideBlank interfaces added
2017-10-03 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' into...
2017-10-03 kjvdheideProper copyright dating added
2017-10-03 kjvdheideMerge branch 'develop' of https://source.jalview.org...
2017-10-03 kjvdheideKept copyright test to just the new classes
2017-10-03 kjvdheideCopyright test
2017-10-02 gmungocJAL-2525 lookup transcript features by Ontology
2017-10-01 Jim ProcterMerge branch 'documentation/JAL-2751patch2102b2' into...
2017-10-01 Jim ProcterJAL-2751 what's new for 2.10.2b2 patch
2017-10-01 Jim ProcterJAL-2751 patch release notes
2017-09-30 Jim ProcterJAL-2751 bump version and new releases entry
2017-09-29 Jim ProcterMerge branch 'feature/JAL-2745ebiHttps' into develop
2017-09-29 kjvdheideBegin separation of GUI and tree calculation logic origin/spikes/koen
2017-09-29 Jim ProcterJAL-2748 JAL-2745 remove uniprot from EBI fetch client...
2017-09-29 Jim ProcterJAL-2745 patch tests for https
2017-09-29 Jim ProcterJAL-2748 formatting
2017-09-29 Jim ProcterJAL-2745 JAL-2748 direct download of XML from uniprot.org
2017-09-29 Jim ProcterJAL-2748 JAL-2745 remove uniprot from EBI fetch client...
2017-09-29 Jim ProcterJAL-2745 patch tests for https
2017-09-29 Jim ProcterJAL-2748 formatting
2017-09-29 Jim ProcterJAL-2745 JAL-2748 direct download of XML from uniprot.org
2017-09-29 kjvdheideMerge branch 'develop' of https://source.jalview.org...
2017-09-29 Jim ProcterMerge branch 'feature/JAL-2745ebiHttps' into develop
2017-09-29 Jim ProcterRevert "JAL-2745 update SIFTS FTP URL to HTTPS"
2017-09-29 Jim ProcterRevert "JAL-2745 update SIFTS FTP URL to HTTPS"
2017-09-29 Jim ProcterMerge branch 'feature/JAL-2745ebiHttps' into develop
2017-09-29 Jim ProcterJAL-2745 update default EBI-eye search URL to HTTPS
2017-09-29 Jim ProcterJAL-2745 update SIFTS FTP URL to HTTPS
2017-09-29 Jim ProcterJAL-2745 update default EBI-eye search URL to HTTPS feature/JAL-2745ebiHttps
2017-09-29 Jim ProcterJAL-2745 update SIFTS FTP URL to HTTPS
2017-09-29 Jim ProcterMerge branch 'feature/JAL-2745ebiHttps' into develop
2017-09-29 Jim ProcterJAL-2745 stderr rather than stdout for unexpected HTTP...
2017-09-29 Jim ProcterJAL-2745 stderr rather than stdout for unexpected HTTP...
2017-09-29 gmungocJAL-2745 update www.ebi.ac.uk to https
2017-09-28 gmungocJAL-2745 update www.ebi.ac.uk to https
2017-09-28 gmungocJAL-2036 set menus after fully loading AlignFrame
2017-09-27 kjvanderheideproof of concept for passing tree data to archaeopteryx
2017-09-25 gmungocJAL-2525 return no features if none matches ontology...
2017-09-20 kiramtJAL-2662 Adjustments to hidden columns benchmark
2017-09-19 kiramtJAL-2662 Updated README
2017-09-19 kiramtJAL-2737 Checkstyle error fixes
2017-09-19 kiramtJAL-2622 Tidied up gitignore, added to README
2017-09-19 kiramtMerge branch 'develop' of https://source.jalview.org...
2017-09-19 kiramtMerge remote-tracking branch 'origin/task/JAL-2662...
2017-09-18 gmungocMerge remote-tracking branch 'origin/patch/JAL-2732...
2017-09-18 gmungocJAL-2728 fine tuned initial split of split frame view
2017-09-15 Jim ProcterMerge branch 'documentation/JAL-2698_release2103' into...
2017-09-15 Jim ProcterJAL-2698 new releases.html entry, whatsNew.html and...
2017-09-15 Jim ProcterMerge branch 'bug/JAL-2728splitFrameDivision' into...
2017-09-15 Jim ProcterJAL-1625 ensure we don’t regress on JAL-20 - we always... patch/JAL-2732
2017-09-15 Jim ProcterJAL-1625 javadoc
2017-09-15 Jim ProcterJAL-2733 redraw after changing the memory status displa...
2017-09-15 Jim ProcterJAL-1625 JAL-1900 preserve the original DesktopManager...
2017-09-15 Jim ProcterJAL-1900 JAL-1625 back out OSX specific double buffer...
2017-09-15 Jim ProcterJAL-1551 standard code formatting
2017-09-15 Jim ProcterJAL-2732 force a redraw after resize/drag to clear...
2017-09-15 gmungocJAL-2728 use right denominator for min/max ratio calcul... bug/JAL-2728splitFrameDivision
2017-09-15 gmungocJAL-2728 limit divider to ensure seqs visible (wip!)
2017-09-15 gmungocJAL-741 add tooltip to feature group checkbox
2017-09-12 gmungocMerge branch 'bug/JAL-2721fastPaintNPE' into develop
2017-09-07 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' of...
2017-09-07 Jim ProcterMerge branch 'bug/JAL-2511idAlignment' into develop
2017-09-07 Jim ProcterJAL-2511 release notes for 2.10.2b1
2017-09-07 Jim ProcterJAL-2511 release notes for 2.10.2b1
2017-09-07 gmungocJAL-2511 invalidate scale panel holder on font change...
2017-09-07 gmungocJAL-2511 invalidate scale panel holder on font change... bug/JAL-2511idAlignment
2017-09-07 Jim ProcterJAL-2675 update release date to 7th Sept
2017-09-07 Jim ProcterJAL-2675 update release date to 7th Sept
2017-09-06 Jim ProcterJAL-2587 makes sure idWidthAdjuster is resized when...
2017-09-06 Jim ProcterJAL-2587 makes sure idWidthAdjuster is resized when...
2017-09-06 gmungocJAL-2721 no fastPaint if img has been nulled by fontCha...
2017-09-06 gmungocJAL-2721 no fastPaint if img has been nulled by fontCha... bug/JAL-2721fastPaintNPE
2017-09-06 Jim ProcterMerge branch 'feature/JAL-2587' into releases/Release_2...
2017-09-06 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' into...
2017-09-06 Jim ProcterJAL-2675 update release date to 6th September 2017
2017-09-06 Jim ProcterMerge JAL-2724 branch 'bug/JAL_2724_annotationcolourong...
2017-09-06 Jim ProcterJAL-2724 release notes for 2.10.2b1
2017-09-06 Jim ProcterJAL-2724 patch to fix ClassCastException - method shoul...
2017-09-06 gmungocMerge remote-tracking branch 'origin/bug/JAL-2722'... portforward/JAL-2675_2102b1to2103
2017-09-06 kiramtJAL-2587 Removed dissolve
2017-09-05 gmungocJAL-2665 check for null selection group image
2017-09-05 Jim ProcterMerge branch 'bug/JAL-2722' into releases/Release_2_10_...
2017-09-05 gmungocJAL-2665 check for null selection group image
2017-09-05 kiramtJAL-2722 unit test bug/JAL-2722
2017-09-05 kiramtJAL-2722 Reinstate allGroups value setting in getResidu...
2017-09-05 Jim ProcterMerge branch 'bug/JAL-2665-2.10.3' into portforward...
2017-09-05 Jim ProcterMerge branch 'master' into portforward/JAL-2675_2102b1t...
2017-09-05 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch'
2017-09-05 Jim ProcterJAL-2675 update destination jar name of min-jabaws...
2017-09-04 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch'
2017-09-04 Jim ProcterJAL-2675 fix grammar
2017-09-04 Jim ProcterJAL-2588 update overview image - show the new gap shading
2017-09-04 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch'
2017-09-04 Jim ProcterJAL-2675 what’s new for 2.10.2b1
2017-09-04 Jim ProcterJAL-2675 source license
2017-09-04 Jim ProcterMerge branch 'feature/JAL-2587' into documentation...
2017-09-04 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1...
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