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jalview.git
2007-04-27 amwaterhousePut alignmentProperties in scrollpane commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseCheck feature group is visible for mouse over features commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseremove System.out commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseAdd param to Jmol path commit | commitdiff | tree | snapshot
2007-04-27 amwaterhousepadGaps moved commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseMake sure mainContainer and owner are not null commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseMust check that featureGroup is visible for mouse over... commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseamendFeatures commit | commitdiff | tree | snapshot
2007-04-27 amwaterhousepaintAlignment(true) commit | commitdiff | tree | snapshot
2007-04-27 amwaterhousePlace new feature on top of existing features commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseMake sure sequence is in mouse over alignment commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseAmend Features commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseColourByStructure not ready yet commit | commitdiff | tree | snapshot
2007-04-27 jprocternewlines in alignment properties converted to <br> commit | commitdiff | tree | snapshot
2007-04-27 jprocterblc header lines inserted as 'comment' alignment property commit | commitdiff | tree | snapshot
2007-04-27 jprocterparsers can generate alignment properties commit | commitdiff | tree | snapshot
2007-04-27 jproctergetProperties returns nullk for no properties commit | commitdiff | tree | snapshot
2007-04-27 jprocterdocumentation and getProperties method commit | commitdiff | tree | snapshot
2007-04-27 amwaterhousealigned boxes commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseThresholdIsMin available in applet commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseSet black if colour null commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseAlignment properties available commit | commitdiff | tree | snapshot
2007-04-27 amwaterhousehide the initial window after selection made commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseone colour flag in annotation export commit | commitdiff | tree | snapshot
2007-04-27 jprocterbugfix for deleted annotation undo commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseAnnotation gradient will use direct colours if no graph... commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseAllow threshold to be min/max commit | commitdiff | tree | snapshot
2007-04-27 amwaterhousehide annotation colouring options commit | commitdiff | tree | snapshot
2007-04-27 amwaterhouseDont colour labels commit | commitdiff | tree | snapshot
2007-04-26 jprocteradded/tested sort by scores menu and added basic extrac... commit | commitdiff | tree | snapshot
2007-04-26 jprocteruse hasScore method to test presence of score in annota... commit | commitdiff | tree | snapshot
2007-04-26 jprocteradded 'sort by sequence associated annotation score' commit | commitdiff | tree | snapshot
2007-04-26 jprocterbug fixed basic score extraction by regex on descriptio... commit | commitdiff | tree | snapshot
2007-04-26 jprocterget annotation by label string commit | commitdiff | tree | snapshot
2007-04-26 jprocterfix '\0' bug from score-only positional annotation commit | commitdiff | tree | snapshot
2007-04-26 jprocterscore is a double, fix bugs for score only annotation... commit | commitdiff | tree | snapshot
2007-04-26 jprocterdouble sort functions commit | commitdiff | tree | snapshot
2007-04-26 jproctertotal annotation score is a double for maximum precision. commit | commitdiff | tree | snapshot
2007-04-26 amwaterhousecheck for null ss character commit | commitdiff | tree | snapshot
2007-04-26 amwaterhousecolourText = false commit | commitdiff | tree | snapshot
2007-04-26 jprocterscore and visible copy construction commit | commitdiff | tree | snapshot
2007-04-26 amwaterhouseEdit seqs commit | commitdiff | tree | snapshot
2007-04-26 jprocterquick fix for verbose fortranesque comments in preamble... commit | commitdiff | tree | snapshot
2007-04-26 jprocterfixed bug in prefix extraction for application commit | commitdiff | tree | snapshot
2007-04-26 jprocterbasic methods for adding scores extracted from description commit | commitdiff | tree | snapshot
2007-04-26 jprocterfix for null annotations commit | commitdiff | tree | snapshot
2007-04-26 jproctergroovy support without compile-time dependency. commit | commitdiff | tree | snapshot
2007-04-26 amwaterhouseremove should be removeElement commit | commitdiff | tree | snapshot
2007-04-26 amwaterhouseAlignment Properties required for annotation file commit | commitdiff | tree | snapshot
2007-04-25 jproctermoving word methods to MapList and begin bug-fix for... commit | commitdiff | tree | snapshot
2007-04-25 jproctergetContentPane().add alignmentProperties popup. commit | commitdiff | tree | snapshot
2007-04-25 amwaterhouseproperties + colours commit | commitdiff | tree | snapshot
2007-04-25 amwaterhouseShow scores commit | commitdiff | tree | snapshot
2007-04-25 amwaterhouseExport annotations with properties commit | commitdiff | tree | snapshot
2007-04-25 amwaterhouseView Properties commit | commitdiff | tree | snapshot
2007-04-25 amwaterhousefix recent file type bug commit | commitdiff | tree | snapshot
2007-04-25 amwaterhousealignmentProperties added commit | commitdiff | tree | snapshot
2007-04-25 jprocterFunctions for parsing free text properties on sequences... commit | commitdiff | tree | snapshot
2007-04-25 jproctertransfer of residue numbering as alignment annotation commit | commitdiff | tree | snapshot
2007-04-25 jprocterAlignmentAnnotation: added annotation score attribute... commit | commitdiff | tree | snapshot
2007-04-24 jprocterbugfix for sequence features mapped to multiple contigs... commit | commitdiff | tree | snapshot
2007-04-24 jprocterupdated mapping for EMBL_Services_V1.1.xsd and tested... commit | commitdiff | tree | snapshot
2007-04-23 jprocterfunctions that operate on references to sequences in... commit | commitdiff | tree | snapshot
2007-04-23 jprocterdistinct methods for getting references to selected... commit | commitdiff | tree | snapshot
2007-04-23 amwaterhousegetColour method added commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseCheck for null displayCharacters commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseDbref fetcher takes sequences, not alignment commit | commitdiff | tree | snapshot
2007-04-23 amwaterhousegetColour added to structures commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseTest out new arrangement commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseGet colour from structure added commit | commitdiff | tree | snapshot
2007-04-23 amwaterhousecheck dispalyChar is not null commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseCheck displayChar is not null commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseColour is null commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseremove seqref annotations commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseremove alignmentAnnotation added commit | commitdiff | tree | snapshot
2007-04-23 amwaterhouseOnly fetch refs for seelcted sequences commit | commitdiff | tree | snapshot
2007-04-20 jprocterfix null annotation values commit | commitdiff | tree | snapshot
2007-04-20 jprocterglobal dbref fetch option in web services menu. commit | commitdiff | tree | snapshot
2007-04-20 jproctervalue only annotation commit | commitdiff | tree | snapshot
2007-04-20 jprocteradds annotation for display (with flag to set alignment... commit | commitdiff | tree | snapshot
2007-04-20 jprocterannotation and seqs vectors are protected members for... commit | commitdiff | tree | snapshot
2007-04-19 jproctertfactor annotation description includes full sequenceID commit | commitdiff | tree | snapshot
2007-04-19 jproctertfactor and occupancy extracted from PDB file, and... commit | commitdiff | tree | snapshot
2007-04-19 jprocterbugfix commit | commitdiff | tree | snapshot
2007-04-19 jprocterfixed column selection cut/paste and self paste. commit | commitdiff | tree | snapshot
2007-04-19 jproctersequence associated alignment annotation copy for colum... commit | commitdiff | tree | snapshot
2007-04-19 jprocterensure edit command gapChar is updated and used for... commit | commitdiff | tree | snapshot
2007-04-19 jprocterpadGaps flag in copy constructor commit | commitdiff | tree | snapshot
2007-04-19 jprocterjavadoc note on padding AlignmentAnnotation to alignmen... commit | commitdiff | tree | snapshot
2007-04-19 jproctercopying sequenceMapping, restrict(alstart/end) and... commit | commitdiff | tree | snapshot
2007-04-19 amwaterhouseREPLACE added to edit command commit | commitdiff | tree | snapshot
2007-04-19 amwaterhouseOnly setDropTarget if Desktop is not null commit | commitdiff | tree | snapshot
2007-04-18 amwaterhouseValidate range for all annotations commit | commitdiff | tree | snapshot
2007-04-18 amwaterhouseRedundant code commented out commit | commitdiff | tree | snapshot
2007-04-18 amwaterhousehastext = false commit | commitdiff | tree | snapshot
2007-04-18 amwaterhousedont set seqref null if index incorrect commit | commitdiff | tree | snapshot
2007-04-18 amwaterhousefeatureGroups not null commit | commitdiff | tree | snapshot
2007-04-18 amwaterhousePad gaps when annotation editing commit | commitdiff | tree | snapshot
2007-04-18 amwaterhousequality has text false commit | commitdiff | tree | snapshot
2007-04-18 amwaterhouseQuality does not have text commit | commitdiff | tree | snapshot
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