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jalview.git
2018-06-04 Jim ProcterJAL-2999 update release notes and patch date to 5th... commit | commitdiff | tree | snapshot
2018-06-02 Jim ProcterJAL-3017 parse multiple variant elements for uniprot... commit | commitdiff | tree | snapshot
2018-05-30 Jim ProcterJAL-2999 2.10.4b1 release 31st May commit | commitdiff | tree | snapshot
2018-05-26 Jim ProcterJAL-2999 release date for 2.10.4b1 set for 27th May... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'documentation/JAL-2999_r2104b1' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2991_exporttosvgwrapview' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'feature/JAL-2994chimeraPath' into release... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 clarify release notes - and mention that short... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-2994 add a few future release points for good measu... feature/JAL-2994chimeraPath commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 temp variable for clearer conditional and... bug/JAL-1460_dragndropWindows commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 javadoc commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2995 tooltip on fields with double-click to browse... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2994 temporary patch with paths to Chimera for... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-2999 issues resolved (or nearly so) for 2.10.4b1 commit | commitdiff | tree | snapshot
2018-05-24 gmungocJAL-2997 additional tests commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 tidied up the use of windows link file parser commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 more complete drag'n'drop debugging info and... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 process .lnk files dragged to Jalview when... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 new data flavor for URLs added belt-and-braces... commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2993 AlignFrame listen for keystrokes in OverviewPanel commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2997 unit test commit | commitdiff | tree | snapshot
2018-05-23 Jim Procterfix for JAL-2991 - we could do better :/ bug/JAL-2991_exporttosvgwrapview commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2997 handle tab-delimited trailing column number... commit | commitdiff | tree | snapshot
2018-05-23 Jim ProcterJAL-2999 release notes and version bump for jalview... commit | commitdiff | tree | snapshot
2018-05-23 Jim ProcterJAL-2895 replace $$Jalview-Version$$ in help.jhm with... commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterJAL-2920 release notes Release_2_10_4 commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into... commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterJAL-2920 basic test for Description from features with... commit | commitdiff | tree | snapshot
2018-05-10 Jim ProcterJAL-2920 simplified logic and added corner cases for... commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterJAL-2906 update release date and release notes commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterJAL-2931 patch IA paths for new build box commit | commitdiff | tree | snapshot
2018-05-09 gmungocJAL-2984 add pdb as sequence(s) if associate structure... commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterMerge branch 'patch/JAL-2976_vaqua4_fallback' into... commit | commitdiff | tree | snapshot
2018-05-09 Jim ProcterJAL-2976 fixed bad equivalence check and implemented... commit | commitdiff | tree | snapshot
2018-05-08 Jim ProcterJAL-2321 release notes commit | commitdiff | tree | snapshot
2018-05-08 Jim ProcterMerge branch 'patch/JAL-2321_addsecstrForDroppedPDBFile... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 patch test to ensure structures are actually... patch/JAL-2321_addsecstrForDroppedPDBFile commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 ensure default is ‘parseImmediately=true’ commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 use configured values for structure derived... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 add secondary structure & temp factor if not... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 use StructureImportSettings singleton settings... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 isParseImmediately() allows the parse() method... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2321 allow JmolParser to be configured before parsi... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2906 apply GPLv3 license source commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterJAL-2960 don’t override a swing method and create infin... commit | commitdiff | tree | snapshot
2018-05-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' of source... commit | commitdiff | tree | snapshot
2018-05-04 gmungocJAL-2906 small tweaks to release notes commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2906 2.10.4 release for 8th May 2018 commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2906 removed mention of experimental features,... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2976 patch NPE when trying to open Uniprot FTS commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2929 JAL-2922 release notes commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2976 typo in installAnywhere build for VAqua dependency commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2960 release notes commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2948 transfer features/annotation is now available... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2960 raise the structure view after adding structur... commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterJAL-2976 Vaqua fallback release notes JAL-2906 commit | commitdiff | tree | snapshot
2018-05-04 Jim ProcterMerge branch 'patch/JAL-2976_vaqua4_fallback' into... commit | commitdiff | tree | snapshot
2018-05-02 Jim ProcterJAL-2976 fallback to Vaqua for Macs that don’t work... commit | commitdiff | tree | snapshot
2018-05-02 Jim ProcterJAL-2976 Vaqua(4) as a dependency commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2899 release notes commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2973 JAL-2974 known defects for 2.10.4 (JAL-2906)
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2018-05-01 Jim ProcterJAL-2925 release notes commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2593 JAL-2945 JAL-2952 JAL-2954 release notes for... commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2223 JAL-2781 JAL-2780 JAL-2946 JAL-2906 release... commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2906 reformat release notes commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2906 typo commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2944 revised docs and structure chooser screen... commit | commitdiff | tree | snapshot
2018-05-01 Jim ProcterJAL-2899 colouring moved from SwingWorker to a backgrou... commit | commitdiff | tree | snapshot
2018-04-30 Jim ProcterMerge branch 'bug/JAL-2899' into releases/Release_2_10_... commit | commitdiff | tree | snapshot
2018-04-30 Jim ProcterJAL-2906 release 2.10.4 on 1st May 2018 commit | commitdiff | tree | snapshot
2018-04-25 Jim ProcterMerge branch 'features/JAL-2944_openStructuresInSelecte... commit | commitdiff | tree | snapshot
2018-04-23 gmungocJAL-2954 more efficient SearchResults.markColumns commit | commitdiff | tree | snapshot
2018-04-23 gmungocJAL-2952 set negative TempFactor values as AlignmentAnn... commit | commitdiff | tree | snapshot
2018-04-18 gmungocJAL-2593 render 'duplicate' features if transparency... commit | commitdiff | tree | snapshot
2018-04-13 gmungocMerge branch 'features/JAL-2944_openStructuresInSelecte... features/JAL-2944_openStructuresInSelectedView commit | commitdiff | tree | snapshot
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec... commit | commitdiff | tree | snapshot
2018-04-12 gmungocJAL-1847 minor post-review updates commit | commitdiff | tree | snapshot
2018-04-12 gmungocJAL-2944 tidies for review comments commit | commitdiff | tree | snapshot
2018-04-11 Jim ProcterJAL-2946 catch unexpected SIFTS mapping exceptions... commit | commitdiff | tree | snapshot
2018-04-09 Jim ProcterJAL-2944 ’new view’ and ‘add to view’ button rather... commit | commitdiff | tree | snapshot
2018-04-09 Jim ProcterJAL-1847 superpose checkbox in structure chooser commit | commitdiff | tree | snapshot
2018-04-09 Jim ProcterJAL-1847 JAL-2944 make superposition step a configurabl... commit | commitdiff | tree | snapshot
2018-04-06 Jim Procterfailing test for JAL-2223 commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2945 resolve model as PDB file. Need to verify... commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2945 failing test for structure mapping commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2945 formatting commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2945 provide access to last highlighted results commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 open selected structures in existing or a... commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 combo box to pick which viewer to load structu... commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 methods to check existence and get a title... commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 allow StructureViewer proxy to be created... commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 get viewer’s title via toString() commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 expose UI update methods in api commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 remove modal prompt logic and expose methods... commit | commitdiff | tree | snapshot
2018-04-05 Jim ProcterJAL-2944 pull up structure viewer discovery routine... commit | commitdiff | tree | snapshot
2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters commit | commitdiff | tree | snapshot
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