git://source.jalview.org / jalview.git / tree
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| -rw-r--r-- | 1454 | 00README | blob | history | raw |
| drwxr-xr-x | - | Docs | tree | history |
| drwxr-xr-x | - | Formats | tree | history |
| -rw-r--r-- | 1058 | INSTALL | blob | history | raw |
| -rw-r--r-- | 7935 | Makefile.in | blob | history | raw |
| drwxr-xr-x | - | Man | tree | history |
| -rw-r--r-- | 3036 | a2m.c | blob | history | raw |
| -rw-r--r-- | 5328 | afetch_main.c | blob | history | raw |
| -rw-r--r-- | 16511 | aligneval.c | blob | history | raw |
| -rw-r--r-- | 19506 | alignio.c | blob | history | raw |
| -rw-r--r-- | 9096 | alistat_main.c | blob | history | raw |
| -rw-r--r-- | 5086 | clustal.c | blob | history | raw |
| -rw-r--r-- | 17583 | cluster.c | blob | history | raw |
| -rw-r--r-- | 7921 | compalign_main.c | blob | history | raw |
| -rw-r--r-- | 10075 | compstruct_main.c | blob | history | raw |
| -rwxr-xr-x | 67705 | configure | blob | history | raw |
| -rw-r--r-- | 5542 | dayhoff.c | blob | history | raw |
| -rw-r--r-- | 3564 | eps.c | blob | history | raw |
| -rw-r--r-- | 7081 | file.c | blob | history | raw |
| -rw-r--r-- | 7817 | getopt.c | blob | history | raw |
| -rw-r--r-- | 11385 | gki.c | blob | history | raw |
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| -rw-r--r-- | 11590 | gsi.c | blob | history | raw |
| -rw-r--r-- | 3258 | gsi.h | blob | history | raw |
| -rw-r--r-- | 12039 | gsi64.c | blob | history | raw |
| -rw-r--r-- | 3773 | gsi64.h | blob | history | raw |
| -rw-r--r-- | 33606 | hsregex.c | blob | history | raw |
| -rwxr-xr-x | 5598 | install-sh | blob | history | raw |
| -rw-r--r-- | 5098 | iupac.c | blob | history | raw |
| -rw-r--r-- | 43122 | msa.c | blob | history | raw |
| -rw-r--r-- | 12198 | msa.h | blob | history | raw |
| -rw-r--r-- | 12546 | msf.c | blob | history | raw |
| -rw-r--r-- | 4774 | phylip.c | blob | history | raw |
| -rw-r--r-- | 1400 | revcomp.c | blob | history | raw |
| -rw-r--r-- | 2550 | revcomp_main.c | blob | history | raw |
| -rw-r--r-- | 3212 | rk.c | blob | history | raw |
| -rw-r--r-- | 1214 | rk.h | blob | history | raw |
| -rw-r--r-- | 26706 | selex.c | blob | history | raw |
| -rw-r--r-- | 3471 | seqencode.c | blob | history | raw |
| -rw-r--r-- | 5190 | seqsplit_main.c | blob | history | raw |
| -rw-r--r-- | 6683 | seqstat_main.c | blob | history | raw |
| -rw-r--r-- | 15384 | sfetch_main.c | blob | history | raw |
| -rw-r--r-- | 14768 | shuffle.c | blob | history | raw |
| -rw-r--r-- | 10828 | shuffle_main.c | blob | history | raw |
| -rw-r--r-- | 6150 | sindex_main.c | blob | history | raw |
| -rw-r--r-- | 2322 | sqerror.c | blob | history | raw |
| -rw-r--r-- | 11298 | sqfuncs.h | blob | history | raw |
| -rw-r--r-- | 55264 | sqio.c | blob | history | raw |
| -rw-r--r-- | 17547 | squid.h.in | blob | history | raw |
| -rw-r--r-- | 2852 | squidconf.h.in | blob | history | raw |
| -rw-r--r-- | 2015 | squidcore.c | blob | history | raw |
| -rw-r--r-- | 901 | sre_ctype.c | blob | history | raw |
| -rw-r--r-- | 19293 | sre_math.c | blob | history | raw |
| -rw-r--r-- | 14209 | sre_string.c | blob | history | raw |
| -rw-r--r-- | 9124 | sreformat_main.c | blob | history | raw |
| -rw-r--r-- | 54162 | ssi.c | blob | history | raw |
| -rw-r--r-- | 7667 | ssi.h | blob | history | raw |
| -rw-r--r-- | 2550 | stack.c | blob | history | raw |
| -rw-r--r-- | 18077 | stockholm.c | blob | history | raw |
| -rw-r--r-- | 1868 | stockholm.h | blob | history | raw |
| -rw-r--r-- | 8421 | stopwatch.c | blob | history | raw |
| -rw-r--r-- | 1951 | stopwatch.h | blob | history | raw |
| -rw-r--r-- | 424 | test_main.c | blob | history | raw |
| -rw-r--r-- | 2522 | translate.c | blob | history | raw |
| -rw-r--r-- | 6861 | translate_main.c | blob | history | raw |
| -rw-r--r-- | 5179 | types.c | blob | history | raw |
| -rw-r--r-- | 24781 | weight.c | blob | history | raw |
| -rw-r--r-- | 6338 | weight_main.c | blob | history | raw |