rio, lca, refactoring
[jalview.git] / forester / java / src / org / forester / pccx /
drwxr-xr-x   ..
-rw-r--r-- 8902 BasicExternalNodeBasedCoverageExtender.java
-rw-r--r-- 3063 BranchCountingBasedScoringMethod.java
-rw-r--r-- 2918 BranchLengthBasedScoringMethod.java
-rw-r--r-- 1228 Coverage.java
-rw-r--r-- 1523 CoverageCalculationMethod.java
-rw-r--r-- 1215 CoverageCalculationOptions.java
-rw-r--r-- 2273 CoverageCalculator.java
-rw-r--r-- 1627 CoverageExtender.java
-rw-r--r-- 3181 ExternalNodeBasedCoverage.java
-rw-r--r-- 6862 ExternalNodeBasedCoverageMethod.java
-rw-r--r-- 2252 ExternalNodeBasedCoverageMethodOptions.java
-rw-r--r-- 3563 LogBranchLengthBasedScoringMethod.java
-rw-r--r-- 3190 ModelingUtils.java
-rw-r--r-- 2865 ScoringMethodForExternalNode.java
-rw-r--r-- 12332 TestPccx.java