source.jalview.org Git - jalview.git/tree - forester/java/src/org/forester/surfacing/

drwxr-xr-x		..
-rw-r--r--	3562	AdjactantDirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2086	AdjactantDirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	8390	BasicBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	6626	BasicCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14245	BasicDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	22493	BasicGenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	3598	CombinableDomains.java	blob \| history \| raw
-rw-r--r--	2532	CombinationsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2462	CombinationsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2448	CountsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	3275	DirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2085	DirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14029	DomainArchitectureBasedGenomeSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2261	DomainCountsBasedPairwiseSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	46572	DomainCountsDifferenceUtil.java	blob \| history \| raw
-rw-r--r--	5212	DomainLengths.java	blob \| history \| raw
-rw-r--r--	6401	DomainLengthsTable.java	blob \| history \| raw
-rw-r--r--	43964	DomainParsimonyCalculator.java	blob \| history \| raw
-rw-r--r--	26699	DomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1909	DomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2752	GenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	1803	MappingResults.java	blob \| history \| raw
-rw-r--r--	1561	PairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1402	PairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	20845	PairwiseGenomeComparator.java	blob \| history \| raw
-rw-r--r--	7646	PrintableSpeciesSpecificDcData.java	blob \| history \| raw
-rw-r--r--	2324	ProteinCountsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2874	SimpleDomain.java	blob \| history \| raw
-rw-r--r--	1986	SpeciesSpecificDcData.java	blob \| history \| raw
-rw-r--r--	2463	SurfacingConstants.java	blob \| history \| raw
-rw-r--r--	199274	SurfacingUtil.java	blob \| history \| raw
-rw-r--r--	268453	TestSurfacing.java	blob \| history \| raw