source.jalview.org Git - jalview.git/tree - forester/java/src/org/forester/surfacing/

drwxr-xr-x		..
-rw-r--r--	2608	AdjactantDirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2117	AdjactantDirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	7034	BasicBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	6842	BasicCombinableDomains.java	blob \| history \| raw
-rw-r--r--	13292	BasicDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	25844	BasicGenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	4378	CombinableDomains.java	blob \| history \| raw
-rw-r--r--	2497	CombinationsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2474	CombinationsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2458	CountsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2550	DirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2081	DirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14086	DomainArchitectureBasedGenomeSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	1859	DomainCountsBasedPairwiseSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	47173	DomainCountsDifferenceUtil.java	blob \| history \| raw
-rw-r--r--	5219	DomainLengths.java	blob \| history \| raw
-rw-r--r--	6422	DomainLengthsTable.java	blob \| history \| raw
-rw-r--r--	44022	DomainParsimonyCalculator.java	blob \| history \| raw
-rw-r--r--	3517	DomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1874	DomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2765	GenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	1803	MappingResults.java	blob \| history \| raw
-rw-r--r--	1526	PairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1367	PairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	21575	PairwiseGenomeComparator.java	blob \| history \| raw
-rw-r--r--	30502	PrintableDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	5979	PrintableSpeciesSpecificDomainSimilariyData.java	blob \| history \| raw
-rw-r--r--	1882	ProteinCountsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	3810	SimpleDomain.java	blob \| history \| raw
-rw-r--r--	1878	SpeciesSpecificDomainSimilariyData.java	blob \| history \| raw
-rw-r--r--	2776	SurfacingConstants.java	blob \| history \| raw
-rw-r--r--	152678	SurfacingUtil.java	blob \| history \| raw
-rw-r--r--	300961	TestSurfacing.java	blob \| history \| raw