source.jalview.org Git - jalview.git/tree - forester/java/src/org/forester/surfacing/

drwxr-xr-x		..
-rw-r--r--	2296	AdjactantDirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2075	AdjactantDirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	6086	BasicBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	6513	BasicCombinableDomains.java	blob \| history \| raw
-rw-r--r--	12702	BasicDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	22493	BasicGenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	3598	CombinableDomains.java	blob \| history \| raw
-rw-r--r--	2532	CombinationsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2462	CombinationsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2493	CountsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2252	DirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2074	DirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14029	DomainArchitectureBasedGenomeSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	1894	DomainCountsBasedPairwiseSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	46568	DomainCountsDifferenceUtil.java	blob \| history \| raw
-rw-r--r--	5212	DomainLengths.java	blob \| history \| raw
-rw-r--r--	6401	DomainLengthsTable.java	blob \| history \| raw
-rw-r--r--	43887	DomainParsimonyCalculator.java	blob \| history \| raw
-rw-r--r--	3597	DomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1909	DomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2752	GenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	1803	MappingResults.java	blob \| history \| raw
-rw-r--r--	1561	PairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1402	PairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	21373	PairwiseGenomeComparator.java	blob \| history \| raw
-rw-r--r--	16168	PrintableDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	6101	PrintableSpeciesSpecificDcData.java	blob \| history \| raw
-rw-r--r--	1917	ProteinCountsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	3827	SimpleDomain.java	blob \| history \| raw
-rw-r--r--	1986	SpeciesSpecificDcData.java	blob \| history \| raw
-rw-r--r--	2373	SurfacingConstants.java	blob \| history \| raw
-rw-r--r--	154001	SurfacingUtil.java	blob \| history \| raw
-rw-r--r--	276024	TestSurfacing.java	blob \| history \| raw