source.jalview.org Git - jalview.git/tree - forester/java/src/org/forester/surfacing/

drwxr-xr-x		..
-rw-r--r--	3562	AdjactantDirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2086	AdjactantDirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	8390	BasicBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	6626	BasicCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14245	BasicDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	16922	BasicGenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	3589	CombinableDomains.java	blob \| history \| raw
-rw-r--r--	2532	CombinationsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2462	CombinationsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2445	CountsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	3275	DirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2085	DirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14015	DomainArchitectureBasedGenomeSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2261	DomainCountsBasedPairwiseSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	46691	DomainCountsDifferenceUtil.java	blob \| history \| raw
-rw-r--r--	5206	DomainLengths.java	blob \| history \| raw
-rw-r--r--	6429	DomainLengthsTable.java	blob \| history \| raw
-rw-r--r--	43379	DomainParsimonyCalculator.java	blob \| history \| raw
-rw-r--r--	26791	DomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2257	DomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2748	GenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	1803	MappingResults.java	blob \| history \| raw
-rw-r--r--	23972	MinimalDomainomeCalculator.java	blob \| history \| raw
-rw-r--r--	17627	MinimalDomainomeCalculatorOLD.java	blob \| history \| raw
-rw-r--r--	1560	PairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1402	PairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	20787	PairwiseGenomeComparator.java	blob \| history \| raw
-rw-r--r--	7649	PrintableSpeciesSpecificDcData.java	blob \| history \| raw
-rw-r--r--	2324	ProteinCountsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	3222	SimpleDomain.java	blob \| history \| raw
-rw-r--r--	1985	SpeciesSpecificDcData.java	blob \| history \| raw
-rw-r--r--	2463	SurfacingConstants.java	blob \| history \| raw
-rw-r--r--	205091	SurfacingUtil.java	blob \| history \| raw
-rw-r--r--	263040	TestSurfacing.java	blob \| history \| raw