source.jalview.org Git - jalview.git/tree - forester/java/src/org/forester/surfacing/

drwxr-xr-x		..
-rw-r--r--	2643	AdjactantDirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2117	AdjactantDirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	7069	BasicBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	6877	BasicCombinableDomains.java	blob \| history \| raw
-rw-r--r--	13327	BasicDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	25844	BasicGenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	4413	CombinableDomains.java	blob \| history \| raw
-rw-r--r--	2532	CombinationsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2509	CombinationsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2493	CountsBasedPairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	2585	DirectedBinaryDomainCombination.java	blob \| history \| raw
-rw-r--r--	2116	DirectedCombinableDomains.java	blob \| history \| raw
-rw-r--r--	14121	DomainArchitectureBasedGenomeSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	1894	DomainCountsBasedPairwiseSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	47208	DomainCountsDifferenceUtil.java	blob \| history \| raw
-rw-r--r--	5254	DomainLengths.java	blob \| history \| raw
-rw-r--r--	6457	DomainLengthsTable.java	blob \| history \| raw
-rw-r--r--	44057	DomainParsimonyCalculator.java	blob \| history \| raw
-rw-r--r--	3552	DomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1909	DomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	2800	GenomeWideCombinableDomains.java	blob \| history \| raw
-rw-r--r--	1803	MappingResults.java	blob \| history \| raw
-rw-r--r--	1561	PairwiseDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	1402	PairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	21610	PairwiseGenomeComparator.java	blob \| history \| raw
-rw-r--r--	30537	PrintableDomainSimilarity.java	blob \| history \| raw
-rw-r--r--	6014	PrintableSpeciesSpecificDomainSimilariyData.java	blob \| history \| raw
-rw-r--r--	1917	ProteinCountsBasedPairwiseDomainSimilarityCalculator.java	blob \| history \| raw
-rw-r--r--	3845	SimpleDomain.java	blob \| history \| raw
-rw-r--r--	1913	SpeciesSpecificDomainSimilariyData.java	blob \| history \| raw
-rw-r--r--	2811	SurfacingConstants.java	blob \| history \| raw
-rw-r--r--	152712	SurfacingUtil.java	blob \| history \| raw
-rw-r--r--	279381	TestSurfacing.java	blob \| history \| raw