source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	5526	APQHandlers.java	blob \| history \| raw
-rw-r--r--	7988	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	174308	AlignFrame.java	blob \| history \| raw
-rw-r--r--	32104	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48943	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13399	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24741	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	12132	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35018	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	35425	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	14508	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19066	AppJmol.java	blob \| history \| raw
-rw-r--r--	4778	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	14138	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2788	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23315	BlogReader.java	blob \| history \| raw
-rw-r--r--	18906	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	15381	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	1597	ChimeraXViewFrame.java	blob \| history \| raw
-rw-r--r--	10068	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	22340	Console.java	blob \| history \| raw
-rw-r--r--	17416	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6297	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10868	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	101105	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21931	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1513	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	65435	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	51509	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10799	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	3767	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15205	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	16318	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	4077	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	3134	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2115	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2623	JalviewChimeraXBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3729	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21660	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10693	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5927	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2575	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23822	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7714	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11789	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20429	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6540	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	69275	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	50675	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6109	PromptUserConfig.java	blob \| history \| raw
-rw-r--r--	5627	PymolBindingModel.java	blob \| history \| raw
-rw-r--r--	10093	PymolViewer.java	blob \| history \| raw
-rwxr-xr-x	7714	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15533	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22463	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	15831	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	64224	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	77085	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25653	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14347	SequenceRenderer.java	blob \| history \| raw
-rw-r--r--	2561	Slider.java	blob \| history \| raw
-rwxr-xr-x	12089	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9365	SplashScreen.java	blob \| history \| raw
-rw-r--r--	33445	SplitFrame.java	blob \| history \| raw
-rw-r--r--	43094	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10848	StructureViewer.java	blob \| history \| raw
-rw-r--r--	32765	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26546	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22334	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26168	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5195	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35304	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8200	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22854	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43547	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10437	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17301	WsPreferences.java	blob \| history \| raw