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JAL-4059 Converting Pattern/Matcher methods that are possibly incompatible with JS...
[jalview.git]
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jalview
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analysis
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AAFrequency.java
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AlignSeq.java
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AlignmentAnnotationUtils.java
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AlignmentSorter.java
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AlignmentUtils.java
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AverageDistanceEngine.java
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AverageDistanceTree.java
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CodingUtils.java
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CodonComparator.java
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Conservation.java
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Finder.java
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Grouping.java
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ParseProperties.java
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Rna.java
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SecStrConsensus.java
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SeqsetUtils.java
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SequenceIdMatcher.java
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StructureFrequency.java
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TreeBuilder.java
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TreeEngine.java
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