format adapter should return AlignmentI
[jalview.git] / src / jalview / analysis /
drwxr-xr-x   ..
-rw-r--r-- 61 .cvsignore
-rwxr-xr-x 9672 AAFrequency.java
-rwxr-xr-x 24003 AlignSeq.java
-rwxr-xr-x 24803 AlignmentSorter.java
-rwxr-xr-x 18622 Conservation.java
-rw-r--r-- 20767 CrossRef.java
-rw-r--r-- 23522 Dna.java
-rw-r--r-- 8080 Finder.java
-rw-r--r-- 8753 Grouping.java
-rw-r--r-- 28140 NJTree.java
-rwxr-xr-x 6964 PCA.java
-rw-r--r-- 6359 ParseProperties.java
-rw-r--r-- 6660 Rna.java
-rwxr-xr-x 8399 SeqsetUtils.java
-rwxr-xr-x 8507 SequenceIdMatcher.java
-rw-r--r-- 13693 StructureFrequency.java
-rw-r--r-- 1279 WUSSParseException.java