Merge branch 'bug/JAL-1923_290b2_group_annots' into develop
[jalview.git] / src / jalview / analysis /
drwxr-xr-x   ..
-rw-r--r-- 61 .cvsignore
-rwxr-xr-x 21069 AAFrequency.java
-rwxr-xr-x 29348 AlignSeq.java
-rw-r--r-- 8207 AlignmentAnnotationUtils.java
-rwxr-xr-x 24815 AlignmentSorter.java
-rw-r--r-- 44867 AlignmentUtils.java
-rw-r--r-- 10824 AnnotationSorter.java
-rw-r--r-- 3437 CodingUtils.java
-rw-r--r-- 3103 CodonComparator.java
-rwxr-xr-x 19416 Conservation.java
-rw-r--r-- 20292 CrossRef.java
-rw-r--r-- 25457 Dna.java
-rw-r--r-- 8891 Finder.java
-rw-r--r-- 10961 Grouping.java
-rw-r--r-- 26368 NJTree.java
-rwxr-xr-x 7791 PCA.java
-rw-r--r-- 5469 ParseProperties.java
-rw-r--r-- 9188 Rna.java
-rw-r--r-- 6211 SecStrConsensus.java
-rwxr-xr-x 8669 SeqsetUtils.java
-rwxr-xr-x 9406 SequenceIdMatcher.java
-rw-r--r-- 13989 StructureFrequency.java
-rw-r--r-- 1300 WUSSParseException.java
drwxr-xr-x - scoremodels