source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	61	.cvsignore	blob \| history \| raw
-rwxr-xr-x	22055	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	25917	AlignSeq.java	blob \| history \| raw
-rw-r--r--	8207	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	24663	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	94728	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	10824	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	2749	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3437	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	22467	Conservation.java	blob \| history \| raw
-rw-r--r--	36670	CrossRef.java	blob \| history \| raw
-rw-r--r--	28849	Dna.java	blob \| history \| raw
-rw-r--r--	9304	Finder.java	blob \| history \| raw
-rw-r--r--	11087	Grouping.java	blob \| history \| raw
-rw-r--r--	3585	NJTree.java	blob \| history \| raw
-rwxr-xr-x	6744	PCA.java	blob \| history \| raw
-rw-r--r--	5469	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12823	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	8992	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9182	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13434	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	9376	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	15660	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history