source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rwxr-xr-x	29737	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	26609	AlignSeq.java	blob \| history \| raw
-rw-r--r--	9360	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	27069	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	88207	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	10886	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	3467	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3750	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	23025	Conservation.java	blob \| history \| raw
-rw-r--r--	37019	CrossRef.java	blob \| history \| raw
-rw-r--r--	29120	Dna.java	blob \| history \| raw
-rw-r--r--	17889	Finder.java	blob \| history \| raw
-rw-r--r--	2105	GeneticCodeI.java	blob \| history \| raw
-rw-r--r--	12210	GeneticCodes.java	blob \| history \| raw
-rw-r--r--	11087	Grouping.java	blob \| history \| raw
-rw-r--r--	3426	NJTree.java	blob \| history \| raw
-rwxr-xr-x	6598	PCA.java	blob \| history \| raw
-rw-r--r--	5514	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12094	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	9413	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9273	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13139	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	10019	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	15084	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history