source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rwxr-xr-x	22844	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	26810	AlignSeq.java	blob \| history \| raw
-rw-r--r--	8184	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	23479	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	89745	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	11602	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	9266	AverageDistanceEngine.java	blob \| history \| raw
-rw-r--r--	3453	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3751	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	23061	Conservation.java	blob \| history \| raw
-rw-r--r--	37884	CrossRef.java	blob \| history \| raw
-rw-r--r--	29168	Dna.java	blob \| history \| raw
-rw-r--r--	20788	Finder.java	blob \| history \| raw
-rw-r--r--	2105	GeneticCodeI.java	blob \| history \| raw
-rw-r--r--	12219	GeneticCodes.java	blob \| history \| raw
-rw-r--r--	11111	Grouping.java	blob \| history \| raw
-rw-r--r--	3420	NJTree.java	blob \| history \| raw
-rwxr-xr-x	6592	PCA.java	blob \| history \| raw
-rw-r--r--	5488	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12122	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	8775	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9272	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13151	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	4675	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	6340	TreeEngine.java	blob \| history \| raw
-rw-r--r--	15046	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history