JAL-1693 make exon alignment for get-xref splitframe (with CDS xref)
[jalview.git] / src / jalview / analysis /
drwxr-xr-x   ..
-rw-r--r-- 61 .cvsignore
-rwxr-xr-x 20223 AAFrequency.java
-rwxr-xr-x 28851 AlignSeq.java
-rw-r--r-- 7162 AlignmentAnnotationUtils.java
-rwxr-xr-x 24753 AlignmentSorter.java
-rw-r--r-- 43477 AlignmentUtils.java
-rw-r--r-- 8831 AnnotationSorter.java
-rw-r--r-- 2572 CodingUtils.java
-rw-r--r-- 2238 CodonComparator.java
-rwxr-xr-x 19096 Conservation.java
-rw-r--r-- 20303 CrossRef.java
-rw-r--r-- 25297 Dna.java
-rw-r--r-- 8881 Finder.java
-rw-r--r-- 10961 Grouping.java
-rw-r--r-- 26380 NJTree.java
-rwxr-xr-x 7763 PCA.java
-rw-r--r-- 6380 ParseProperties.java
-rw-r--r-- 8961 Rna.java
-rw-r--r-- 6211 SecStrConsensus.java
-rwxr-xr-x 8633 SeqsetUtils.java
-rwxr-xr-x 8857 SequenceIdMatcher.java
-rw-r--r-- 14039 StructureFrequency.java
-rw-r--r-- 1300 WUSSParseException.java
drwxr-xr-x - scoremodels