Merge branch 'bug/JAL-1644_Finder-logic-improvement' into develop
[jalview.git] / src / jalview / analysis /
drwxr-xr-x   ..
-rw-r--r-- 61 .cvsignore
-rwxr-xr-x 10465 AAFrequency.java
-rwxr-xr-x 28667 AlignSeq.java
-rw-r--r-- 7162 AlignmentAnnotationUtils.java
-rwxr-xr-x 24789 AlignmentSorter.java
-rw-r--r-- 4863 AlignmentUtils.java
-rw-r--r-- 8831 AnnotationSorter.java
-rwxr-xr-x 19086 Conservation.java
-rw-r--r-- 20778 CrossRef.java
-rw-r--r-- 27443 Dna.java
-rw-r--r-- 8547 Finder.java
-rw-r--r-- 8764 Grouping.java
-rw-r--r-- 26370 NJTree.java
-rwxr-xr-x 7753 PCA.java
-rw-r--r-- 6370 ParseProperties.java
-rw-r--r-- 8951 Rna.java
-rw-r--r-- 6201 SecStrConsensus.java
-rwxr-xr-x 8410 SeqsetUtils.java
-rwxr-xr-x 8654 SequenceIdMatcher.java
-rw-r--r-- 13307 StructureFrequency.java
-rw-r--r-- 1290 WUSSParseException.java
drwxr-xr-x - scoremodels