Merge branch 'bug/JAL-1923_290b2_group_annots' into develop
[jalview.git] / src / jalview / datamodel /
drwxr-xr-x   ..
-rw-r--r-- 111 .cvsignore
-rwxr-xr-x 1075 ASequence.java
-rwxr-xr-x 1039 ASequenceI.java
-rw-r--r-- 2979 AlignedCodon.java
-rw-r--r-- 11734 AlignedCodonFrame.java
-rwxr-xr-x 38670 Alignment.java
-rwxr-xr-x 37299 AlignmentAnnotation.java
-rw-r--r-- 1986 AlignmentExportData.java
-rwxr-xr-x 14136 AlignmentI.java
-rwxr-xr-x 7250 AlignmentOrder.java
-rw-r--r-- 36577 AlignmentView.java
-rw-r--r-- 1527 AnnotatedCollectionI.java
-rwxr-xr-x 4639 Annotation.java
-rwxr-xr-x 5341 BinaryNode.java
-rwxr-xr-x 4549 BinarySequence.java
-rw-r--r-- 11114 CigarArray.java
-rw-r--r-- 19877 CigarBase.java
-rw-r--r-- 1697 CigarCigar.java
-rw-r--r-- 1172 CigarSimple.java
-rw-r--r-- 33597 ColumnSelection.java
-rwxr-xr-x 4614 DBRefEntry.java
-rwxr-xr-x 3627 DBRefSource.java
-rw-r--r-- 2129 FeatureProperties.java
-rwxr-xr-x 2011 GraphLine.java
-rwxr-xr-x 6950 HiddenSequences.java
-rw-r--r-- 1107 IncompleteCodonException.java
-rw-r--r-- 16254 Mapping.java
-rw-r--r-- 999 NodeTransformI.java
-rwxr-xr-x 3576 PDBEntry.java
-rwxr-xr-x 1426 Provenance.java
-rwxr-xr-x 1331 ProvenanceEntry.java
-rw-r--r-- 1677 RnaViewerModel.java
-rwxr-xr-x 8903 SearchResults.java
-rw-r--r-- 1502 SecondaryStructureAnnotation.java
-rw-r--r-- 18014 SeqCigar.java
-rwxr-xr-x 29311 Sequence.java
-rw-r--r-- 1814 SequenceCollectionI.java
-rw-r--r-- 1546 SequenceDummy.java
-rwxr-xr-x 6247 SequenceFeature.java
-rwxr-xr-x 29671 SequenceGroup.java
-rwxr-xr-x 10911 SequenceI.java
-rwxr-xr-x 4039 SequenceNode.java
-rwxr-xr-x 1477 SequencePoint.java
-rw-r--r-- 4401 StructureViewerModel.java
-rwxr-xr-x 2132 UniprotEntry.java
-rwxr-xr-x 1270 UniprotFile.java
-rwxr-xr-x 1336 UniprotProteinName.java
-rwxr-xr-x 1531 UniprotSequence.java
drwxr-xr-x - xdb