debugged mappings and translated sequence recovery
[jalview.git] / src / jalview / datamodel /
drwxr-xr-x   ..
-rw-r--r-- 111 .cvsignore
-rw-r--r-- 7179 AlignedCodonFrame.java
-rwxr-xr-x 16808 Alignment.java
-rwxr-xr-x 16818 AlignmentAnnotation.java
-rwxr-xr-x 7887 AlignmentI.java
-rwxr-xr-x 7408 AlignmentOrder.java
-rw-r--r-- 15065 AlignmentView.java
-rwxr-xr-x 2820 Annotation.java
-rwxr-xr-x 5458 BinaryNode.java
-rwxr-xr-x 3359 BinarySequence.java
-rw-r--r-- 7083 CigarArray.java
-rw-r--r-- 20381 CigarBase.java
-rw-r--r-- 1651 CigarCigar.java
-rw-r--r-- 1325 CigarSimple.java
-rw-r--r-- 20754 ColumnSelection.java
-rwxr-xr-x 3168 DBRefEntry.java
-rwxr-xr-x 1501 DBRefSource.java
-rw-r--r-- 697 FeatureProperties.java
-rwxr-xr-x 1465 GraphLine.java
-rwxr-xr-x 6479 HiddenSequences.java
-rw-r--r-- 9327 Mapping.java
-rwxr-xr-x 1724 PDBEntry.java
-rwxr-xr-x 1471 Provenance.java
-rwxr-xr-x 1372 ProvenanceEntry.java
-rwxr-xr-x 3930 SearchResults.java
-rw-r--r-- 20138 SeqCigar.java
-rwxr-xr-x 19422 Sequence.java
-rwxr-xr-x 6020 SequenceFeature.java
-rwxr-xr-x 12395 SequenceGroup.java
-rwxr-xr-x 5870 SequenceI.java
-rwxr-xr-x 3812 SequenceNode.java
-rwxr-xr-x 1464 SequencePoint.java
-rwxr-xr-x 1980 UniprotEntry.java
-rwxr-xr-x 1126 UniprotFile.java
-rwxr-xr-x 1177 UniprotProteinName.java
-rwxr-xr-x 1362 UniprotSequence.java
drwxr-xr-x - xdb