Merge branch 'releases/Release_2_10_0_Branch'
[jalview.git] / src / jalview / datamodel /
drwxr-xr-x   ..
-rw-r--r-- 111 .cvsignore
-rwxr-xr-x 1067 ASequence.java
-rwxr-xr-x 1031 ASequenceI.java
-rw-r--r-- 3194 AlignedCodon.java
-rw-r--r-- 20643 AlignedCodonFrame.java
-rwxr-xr-x 44217 Alignment.java
-rwxr-xr-x 39177 AlignmentAnnotation.java
-rw-r--r-- 1978 AlignmentExportData.java
-rwxr-xr-x 15164 AlignmentI.java
-rwxr-xr-x 7242 AlignmentOrder.java
-rw-r--r-- 37093 AlignmentView.java
-rw-r--r-- 1519 AnnotatedCollectionI.java
-rwxr-xr-x 4631 Annotation.java
-rwxr-xr-x 5333 BinaryNode.java
-rwxr-xr-x 4541 BinarySequence.java
-rw-r--r-- 11106 CigarArray.java
-rw-r--r-- 19884 CigarBase.java
-rw-r--r-- 1689 CigarCigar.java
-rw-r--r-- 1164 CigarSimple.java
-rw-r--r-- 44131 ColumnSelection.java
-rwxr-xr-x 8475 DBRefEntry.java
-rwxr-xr-x 3279 DBRefSource.java
-rw-r--r-- 2119 FeatureProperties.java
-rwxr-xr-x 2003 GraphLine.java
-rwxr-xr-x 8276 HiddenSequences.java
-rw-r--r-- 1099 IncompleteCodonException.java
-rw-r--r-- 17698 Mapping.java
-rw-r--r-- 1911 MappingType.java
-rw-r--r-- 991 NodeTransformI.java
-rwxr-xr-x 10107 PDBEntry.java
-rwxr-xr-x 1418 Provenance.java
-rwxr-xr-x 1323 ProvenanceEntry.java
-rw-r--r-- 1669 RnaViewerModel.java
-rwxr-xr-x 9240 SearchResults.java
-rw-r--r-- 1494 SecondaryStructureAnnotation.java
-rw-r--r-- 18778 SeqCigar.java
-rwxr-xr-x 33598 Sequence.java
-rw-r--r-- 1806 SequenceCollectionI.java
-rw-r--r-- 1763 SequenceDummy.java
-rwxr-xr-x 11107 SequenceFeature.java
-rwxr-xr-x 30632 SequenceGroup.java
-rwxr-xr-x 12669 SequenceI.java
-rwxr-xr-x 4031 SequenceNode.java
-rwxr-xr-x 1469 SequencePoint.java
-rw-r--r-- 4393 StructureViewerModel.java
-rwxr-xr-x 2124 UniprotEntry.java
-rwxr-xr-x 1262 UniprotFile.java
-rwxr-xr-x 1328 UniprotProteinName.java
-rwxr-xr-x 1523 UniprotSequence.java
drwxr-xr-x - xdb