source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	5518	APQHandlers.java	blob \| history \| raw
-rw-r--r--	3080	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	172188	AlignFrame.java	blob \| history \| raw
-rw-r--r--	31377	AlignViewport.java	blob \| history \| raw
-rw-r--r--	49742	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13461	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24606	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	12077	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	34617	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	34397	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	14508	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19825	AppJmol.java	blob \| history \| raw
-rw-r--r--	5159	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	13976	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2788	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23356	BlogReader.java	blob \| history \| raw
-rw-r--r--	18837	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23227	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10068	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	22077	Console.java	blob \| history \| raw
-rw-r--r--	17400	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6241	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10751	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	95394	Desktop.java	blob \| history \| raw
-rw-r--r--	4256	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2811	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	18279	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	62031	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	50660	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	11141	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	4217	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2781	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15142	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	14856	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	4077	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	3134	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3690	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	3729	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	9976	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10449	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2575	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23921	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7655	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11581	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20927	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6129	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	67296	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	43993	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6109	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7703	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15515	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22463	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4211	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	15803	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	61819	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	74955	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	30568	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14347	SequenceRenderer.java	blob \| history \| raw
-rw-r--r--	2739	Slider.java	blob \| history \| raw
-rwxr-xr-x	12165	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	33413	SplitFrame.java	blob \| history \| raw
-rw-r--r--	42700	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10388	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27292	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	7698	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26415	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	24111	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	25804	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5195	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35354	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22982	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43554	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10371	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17315	WsPreferences.java	blob \| history \| raw