source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	170051	AlignFrame.java	blob \| history \| raw
-rw-r--r--	26418	AlignViewport.java	blob \| history \| raw
-rw-r--r--	42789	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17700	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13872	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24055	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8590	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	31640	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24736	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	9209	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	34903	AppJmol.java	blob \| history \| raw
-rw-r--r--	4959	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	12469	AppVarna.java	blob \| history \| raw
-rw-r--r--	27526	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2671	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23283	BlogReader.java	blob \| history \| raw
-rw-r--r--	32447	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16451	Console.java	blob \| history \| raw
-rw-r--r--	5558	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	6655	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22996	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	81793	Desktop.java	blob \| history \| raw
-rw-r--r--	3913	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2620	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15043	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12746	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50557	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	9305	Finder.java	blob \| history \| raw
-rwxr-xr-x	7009	FontChooser.java	blob \| history \| raw
-rw-r--r--	3318	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	1894	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11314	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12867	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3330	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14955	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	149813	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15219	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2057	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4237	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	6180	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2640	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23792	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	10980	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19910	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6116	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3936	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	83111	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	31123	Preferences.java	blob \| history \| raw
-rw-r--r--	6309	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7886	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7606	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15717	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	16594	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4177	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12721	ScalePanel.java	blob \| history \| raw
-rw-r--r--	18632	ScriptWindow.java	blob \| history \| raw
-rwxr-xr-x	23162	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	44612	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25442	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	12467	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8116	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	4750	StructureViewer.java	blob \| history \| raw
-rw-r--r--	4987	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5371	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	22705	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23241	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26777	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5266	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35066	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8595	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	24181	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43049	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9916	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17575	WsPreferences.java	blob \| history \| raw