source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	169772	AlignFrame.java	blob \| history \| raw
-rw-r--r--	26410	AlignViewport.java	blob \| history \| raw
-rw-r--r--	42781	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17700	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13864	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24055	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8582	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	31632	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24728	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	9209	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	34895	AppJmol.java	blob \| history \| raw
-rw-r--r--	4951	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	12461	AppVarna.java	blob \| history \| raw
-rw-r--r--	27518	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2663	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23275	BlogReader.java	blob \| history \| raw
-rw-r--r--	32439	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16443	Console.java	blob \| history \| raw
-rw-r--r--	5550	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	6647	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22988	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	81785	Desktop.java	blob \| history \| raw
-rw-r--r--	3905	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2612	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15035	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12738	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50549	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	9297	Finder.java	blob \| history \| raw
-rwxr-xr-x	7001	FontChooser.java	blob \| history \| raw
-rw-r--r--	3318	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	1894	Help.java	blob \| history \| raw
-rw-r--r--	1728	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1210	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11306	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12859	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3322	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14947	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	149805	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15211	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1932	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2984	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2057	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4229	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	6172	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2883	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2632	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23784	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1015	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	10972	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19902	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6108	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3928	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	83103	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	31115	Preferences.java	blob \| history \| raw
-rw-r--r--	6301	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7878	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15709	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	16586	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4169	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12713	ScalePanel.java	blob \| history \| raw
-rw-r--r--	18624	ScriptWindow.java	blob \| history \| raw
-rwxr-xr-x	23154	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	44604	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25434	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	12459	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8108	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9300	SplashScreen.java	blob \| history \| raw
-rw-r--r--	4742	StructureViewer.java	blob \| history \| raw
-rw-r--r--	4987	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5363	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	22697	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23233	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26769	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5258	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35058	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8587	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	24173	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43041	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9908	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17567	WsPreferences.java	blob \| history \| raw