source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	7997	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	170343	AlignFrame.java	blob \| history \| raw
-rw-r--r--	30575	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48111	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17879	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13776	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	25016	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9537	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	35222	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	34963	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19595	AppJmol.java	blob \| history \| raw
-rw-r--r--	5562	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	14147	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2797	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23311	BlogReader.java	blob \| history \| raw
-rw-r--r--	18915	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23058	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10069	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17300	Console.java	blob \| history \| raw
-rw-r--r--	16874	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6297	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10895	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	107594	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21944	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1552	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	57692	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	50767	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10734	Finder.java	blob \| history \| raw
-rwxr-xr-x	12046	FontChooser.java	blob \| history \| raw
-rw-r--r--	3767	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	15309	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	16938	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3875	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1968	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2269	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3626	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3773	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21660	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	10771	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5928	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2943	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2584	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24077	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7650	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11789	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20275	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6540	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	67032	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	44044	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6118	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7714	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15533	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22456	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	15831	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	64370	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	72524	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25501	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13958	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	13059	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	10518	SplashScreen.java	blob \| history \| raw
-rw-r--r--	23824	SplitFrame.java	blob \| history \| raw
-rw-r--r--	42923	StructureChooser.java	blob \| history \| raw
-rw-r--r--	10388	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27673	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26556	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22058	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26213	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5193	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35381	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22247	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43596	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10476	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17405	WsPreferences.java	blob \| history \| raw