source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	176049	AlignFrame.java	blob \| history \| raw
-rw-r--r--	32383	AlignViewport.java	blob \| history \| raw
-rw-r--r--	43549	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17700	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13862	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24055	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8580	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	31742	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24783	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	9209	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	34893	AppJmol.java	blob \| history \| raw
-rw-r--r--	4949	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	12459	AppVarna.java	blob \| history \| raw
-rw-r--r--	26274	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2661	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23273	BlogReader.java	blob \| history \| raw
-rw-r--r--	32437	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16441	Console.java	blob \| history \| raw
-rw-r--r--	5600	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	6937	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22986	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	82183	Desktop.java	blob \| history \| raw
-rw-r--r--	3903	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2610	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15033	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12736	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50595	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	9295	Finder.java	blob \| history \| raw
-rwxr-xr-x	6999	FontChooser.java	blob \| history \| raw
-rw-r--r--	3318	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	1894	Help.java	blob \| history \| raw
-rw-r--r--	1726	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1208	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11715	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12926	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3405	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14945	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	148995	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15083	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1930	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2982	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2057	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4227	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	7827	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2881	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2630	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23782	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1013	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11220	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19948	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6328	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3978	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	83021	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	31113	Preferences.java	blob \| history \| raw
-rw-r--r--	6299	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7886	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7596	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15707	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	16632	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4167	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12715	ScalePanel.java	blob \| history \| raw
-rw-r--r--	18622	ScriptWindow.java	blob \| history \| raw
-rwxr-xr-x	23210	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	46943	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25606	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	12619	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8344	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9298	SplashScreen.java	blob \| history \| raw
-rw-r--r--	5681	SplitFrame.java	blob \| history \| raw
-rw-r--r--	4740	StructureViewer.java	blob \| history \| raw
-rw-r--r--	4987	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5733	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	24992	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23245	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26746	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5256	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35068	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8585	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	24171	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43039	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9906	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17565	WsPreferences.java	blob \| history \| raw