source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	5526	APQHandlers.java	blob \| history \| raw
-rw-r--r--	7997	AlignExportOptions.java	blob \| history \| raw
-rw-r--r--	175843	AlignFrame.java	blob \| history \| raw
-rw-r--r--	33204	AlignViewport.java	blob \| history \| raw
-rw-r--r--	55523	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17961	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13776	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24998	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	12200	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	34783	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	35210	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12858	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	19614	AppJmol.java	blob \| history \| raw
-rw-r--r--	5562	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	20079	AppVarna.java	blob \| history \| raw
-rw-r--r--	14138	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	7096	AquaInternalFrameManager.java	blob \| history \| raw
-rw-r--r--	2931	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23315	BlogReader.java	blob \| history \| raw
-rw-r--r--	21541	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	23063	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	10069	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1871	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17252	Console.java	blob \| history \| raw
-rw-r--r--	17421	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6297	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10895	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	99809	Desktop.java	blob \| history \| raw
-rw-r--r--	3388	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	21944	FeatureEditor.java	blob \| history \| raw
-rw-r--r--	1513	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	65499	FeatureSettings.java	blob \| history \| raw
-rw-r--r--	51762	FeatureTypeSettings.java	blob \| history \| raw
-rwxr-xr-x	10803	Finder.java	blob \| history \| raw
-rwxr-xr-x	12210	FontChooser.java	blob \| history \| raw
-rw-r--r--	3767	Help.java	blob \| history \| raw
-rw-r--r--	1795	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	16413	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	16327	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	4077	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	6925	ImageExporter.java	blob \| history \| raw
-rw-r--r--	14420	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	3134	JalviewBooleanRadioButtons.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3690	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	2074	JalviewColourChooser.java	blob \| history \| raw
-rw-r--r--	3744	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	21660	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	11051	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	5928	LineartOptions.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2584	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24077	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	7714	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	11509	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20490	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	7018	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	5237	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	69052	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	49095	Preferences.java	blob \| history \| raw
-rw-r--r--	7324	ProgressBar.java	blob \| history \| raw
-rw-r--r--	4442	ProgressPanel.java	blob \| history \| raw
-rw-r--r--	6118	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7640	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7630	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15533	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	22463	RotatableCanvas.java	blob \| history \| raw
-rwxr-xr-x	15760	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	67304	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	77662	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	25744	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14347	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	12225	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	8350	SplashScreen.java	blob \| history \| raw
-rw-r--r--	33369	SplitFrame.java	blob \| history \| raw
-rw-r--r--	39958	StructureChooser.java	blob \| history \| raw
-rw-r--r--	14470	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27644	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	8482	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26601	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22159	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26295	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5204	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35396	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8153	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	23121	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43563	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	10447	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17370	WsPreferences.java	blob \| history \| raw