source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	42	.cvsignore	blob \| history \| raw
-rw-r--r--	2653	AMSAFile.java	blob \| history \| raw
-rwxr-xr-x	9709	AlignFile.java	blob \| history \| raw
-rw-r--r--	4133	AlignmentProperties.java	blob \| history \| raw
-rwxr-xr-x	51764	AnnotationFile.java	blob \| history \| raw
-rwxr-xr-x	24648	AppletFormatAdapter.java	blob \| history \| raw
-rwxr-xr-x	6303	BLCFile.java	blob \| history \| raw
-rw-r--r--	10939	BioJsHTMLOutput.java	blob \| history \| raw
-rw-r--r--	991	ClansFile.java	blob \| history \| raw
-rwxr-xr-x	6566	ClustalFile.java	blob \| history \| raw
-rw-r--r--	1369	DBRefFile.java	blob \| history \| raw
-rwxr-xr-x	5285	FastaFile.java	blob \| history \| raw
-rwxr-xr-x	41747	FeaturesFile.java	blob \| history \| raw
-rwxr-xr-x	16576	FileLoader.java	blob \| history \| raw
-rwxr-xr-x	15161	FileParse.java	blob \| history \| raw
-rwxr-xr-x	11114	FormatAdapter.java	blob \| history \| raw
-rwxr-xr-x	12439	HTMLOutput.java	blob \| history \| raw
-rw-r--r--	4493	HtmlFile.java	blob \| history \| raw
-rw-r--r--	32038	HtmlSvgOutput.java	blob \| history \| raw
-rwxr-xr-x	11152	IdentifyFile.java	blob \| history \| raw
-rw-r--r--	1610	InputStreamParser.java	blob \| history \| raw
-rwxr-xr-x	11731	JPredFile.java	blob \| history \| raw
-rw-r--r--	28801	JSONFile.java	blob \| history \| raw
-rwxr-xr-x	8392	JalviewFileChooser.java	blob \| history \| raw
-rwxr-xr-x	4046	JalviewFileFilter.java	blob \| history \| raw
-rwxr-xr-x	3268	JalviewFileView.java	blob \| history \| raw
-rwxr-xr-x	8675	JnetAnnotationMaker.java	blob \| history \| raw
-rwxr-xr-x	9389	MSFfile.java	blob \| history \| raw
-rw-r--r--	1329	MatrixFile.java	blob \| history \| raw
-rwxr-xr-x	10347	ModellerDescription.java	blob \| history \| raw
-rwxr-xr-x	27386	NewickFile.java	blob \| history \| raw
-rwxr-xr-x	4987	PIRFile.java	blob \| history \| raw
-rwxr-xr-x	4288	PfamFile.java	blob \| history \| raw
-rw-r--r--	9438	PhylipFile.java	blob \| history \| raw
-rwxr-xr-x	4515	PileUpfile.java	blob \| history \| raw
-rw-r--r--	6856	RnamlFile.java	blob \| history \| raw
-rw-r--r--	11884	SequenceAnnotationReport.java	blob \| history \| raw
-rw-r--r--	8758	SimpleBlastFile.java	blob \| history \| raw
-rw-r--r--	37337	StockholmFile.java	blob \| history \| raw
-rw-r--r--	17215	TCoffeeScoreFile.java	blob \| history \| raw
-rw-r--r--	93354	VamsasAppDatastore.java	blob \| history \| raw
-rwxr-xr-x	8185	WSWUBlastClient.java	blob \| history \| raw
drwxr-xr-x	-	gff	tree \| history
drwxr-xr-x	-	packed	tree \| history
drwxr-xr-x	-	vamsas	tree \| history