updated to jalview 2.1 and begun ArchiveClient/VamsasClient/VamsasStore updates.
[jalview.git] / src / jalview / io /
drwxr-xr-x   ..
-rwxr-xr-x 4019 AlignFile.java
-rwxr-xr-x 11790 AnnotationFile.java
-rwxr-xr-x 7395 AppletFormatAdapter.java
-rwxr-xr-x 5696 BLCFile.java
-rwxr-xr-x 5103 ClustalFile.java
-rw-r--r-- 10533 DBRefFetcher.java
-rwxr-xr-x 14615 DasSequenceFeatureFetcher.java
-rwxr-xr-x 4942 EBIFetchClient.java
-rwxr-xr-x 4365 FastaFile.java
-rwxr-xr-x 14562 FeaturesFile.java
-rwxr-xr-x 5359 FileLoader.java
-rwxr-xr-x 1989 FileParse.java
-rwxr-xr-x 3774 FormatAdapter.java
-rwxr-xr-x 11228 HTMLOutput.java
-rwxr-xr-x 4707 IdentifyFile.java
-rwxr-xr-x 10843 JPredFile.java
-rwxr-xr-x 6947 JalviewFileChooser.java
-rwxr-xr-x 4025 JalviewFileFilter.java
-rwxr-xr-x 2751 JalviewFileView.java
-rwxr-xr-x 4918 JnetAnnotationMaker.java
-rwxr-xr-x 10844 MSFfile.java
-rwxr-xr-x 9633 ModellerDescription.java
-rwxr-xr-x 23482 NewickFile.java
-rwxr-xr-x 4922 PIRFile.java
-rwxr-xr-x 4030 PfamFile.java
-rwxr-xr-x 4190 PileUpfile.java
-rw-r--r-- 18896 StockholmFile.java
-rwxr-xr-x 57138 VamsasDatastore.java
-rwxr-xr-x 9229 WSWUBlastClient.java