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Merge branch 'releases/Release_2_11_4_Branch'
[jalview.git]
/
surfacing
/
drwxr-xr-x
..
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AdjactantDirectedBinaryDomainCombination.java
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AdjactantDirectedCombinableDomains.java
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BasicBinaryDomainCombination.java
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BasicCombinableDomains.java
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BasicDomain.java
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BasicDomainSimilarityCalculator.java
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BasicGenomeWideCombinableDomains.java
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BasicProtein.java
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BasicSpecies.java
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BinaryDomainCombination.java
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CombinableDomains.java
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CombinationsBasedPairwiseDomainSimilarity.java
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CombinationsBasedPairwiseDomainSimilarityCalculator.java
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CountsBasedPairwiseDomainSimilarity.java
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DirectedBinaryDomainCombination.java
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DirectedCombinableDomains.java
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Domain.java
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DomainArchitectureBasedGenomeSimilarityCalculator.java
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DomainCountsBasedPairwiseSimilarityCalculator.java
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DomainCountsDifferenceUtil.java
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DomainId.java
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DomainLengths.java
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DomainLengthsTable.java
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DomainParsimonyCalculator.java
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DomainSimilarity.java
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DomainSimilarityCalculator.java
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GenomeWideCombinableDomains.java
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MappingResults.java
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PairwiseDomainSimilarity.java
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PairwiseDomainSimilarityCalculator.java
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PairwiseGenomeComparator.java
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PrintableDomainSimilarity.java
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PrintableSpeciesSpecificDomainSimilariyData.java
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Protein.java
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ProteinCountsBasedPairwiseDomainSimilarityCalculator.java
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ProteinId.java
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SimpleDomain.java
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Species.java
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SpeciesSpecificDomainSimilariyData.java
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SurfacingConstants.java
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SurfacingUtil.java
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TestSurfacing.java
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