source.jalview.org Git - jalview.git/tree

-rw-r--r--	284	.cvsignore	blob \| raw
-rw-r--r--	165231	AlignFrame.java	blob \| raw
-rw-r--r--	26948	AlignViewport.java	blob \| raw
-rw-r--r--	39868	AlignmentPanel.java	blob \| raw
-rw-r--r--	19451	AnnotationColourChooser.java	blob \| raw
-rw-r--r--	9081	AnnotationExporter.java	blob \| raw
-rwxr-xr-x	28075	AnnotationLabels.java	blob \| raw
-rwxr-xr-x	23420	AnnotationPanel.java	blob \| raw
-rw-r--r--	36712	AppJmol.java	blob \| raw
-rw-r--r--	5570	AppJmolBinding.java	blob \| raw
-rw-r--r--	12459	AppVarna.java	blob \| raw
-rw-r--r--	27516	AppVarnaBinding.java	blob \| raw
-rw-r--r--	2246	AssociatePdbFileWithSeq.java	blob \| raw
-rw-r--r--	23185	BlogReader.java	blob \| raw
-rw-r--r--	16482	Console.java	blob \| raw
-rw-r--r--	5516	CutAndPasteHtmlTransfer.java	blob \| raw
-rw-r--r--	6613	CutAndPasteTransfer.java	blob \| raw
-rw-r--r--	22922	DasSourceBrowser.java	blob \| raw
-rw-r--r--	77119	Desktop.java	blob \| raw
-rw-r--r--	3903	EPSOptions.java	blob \| raw
-rw-r--r--	2610	EditNameDialog.java	blob \| raw
-rw-r--r--	15041	FeatureColourChooser.java	blob \| raw
-rw-r--r--	41261	FeatureRenderer.java	blob \| raw
-rw-r--r--	50317	FeatureSettings.java	blob \| raw
-rwxr-xr-x	6901	Finder.java	blob \| raw
-rwxr-xr-x	6972	FontChooser.java	blob \| raw
-rw-r--r--	1726	IProgressIndicator.java	blob \| raw
-rw-r--r--	1208	IProgressIndicatorHandler.java	blob \| raw
-rwxr-xr-x	11075	IdCanvas.java	blob \| raw
-rwxr-xr-x	10943	IdPanel.java	blob \| raw
-rwxr-xr-x	3300	IdwidthAdjuster.java	blob \| raw
-rw-r--r--	14934	JDatabaseTree.java	blob \| raw
-rw-r--r--	142063	Jalview2XML.java	blob \| raw
-rwxr-xr-x	14137	Jalview2XML_V1.java	blob \| raw
-rw-r--r--	1930	JalviewAppender.java	blob \| raw
-rw-r--r--	2982	JalviewChangeSupport.java	blob \| raw
-rw-r--r--	4227	JalviewDialog.java	blob \| raw
-rw-r--r--	5472	JvSwingUtils.java	blob \| raw
-rw-r--r--	2881	MenuChooser.java	blob \| raw
-rw-r--r--	2663	OOMWarning.java	blob \| raw
-rw-r--r--	23928	OptsAndParamsPage.java	blob \| raw
-rw-r--r--	1013	OptsParametersContainerI.java	blob \| raw
-rwxr-xr-x	10924	OverviewPanel.java	blob \| raw
-rw-r--r--	18941	PCAPanel.java	blob \| raw
-rwxr-xr-x	6106	PaintRefresher.java	blob \| raw
-rwxr-xr-x	4028	PairwiseAlignPanel.java	blob \| raw
-rw-r--r--	65404	PopupMenu.java	blob \| raw
-rwxr-xr-x	24766	Preferences.java	blob \| raw
-rw-r--r--	6299	PromptUserConfig.java	blob \| raw
-rwxr-xr-x	7168	RedundancyPanel.java	blob \| raw
-rw-r--r--	7596	RestInputParamEditDialog.java	blob \| raw
-rw-r--r--	15707	RestServiceEditorPane.java	blob \| raw
-rwxr-xr-x	16584	RotatableCanvas.java	blob \| raw
-rwxr-xr-x	12182	ScalePanel.java	blob \| raw
-rw-r--r--	18571	ScriptWindow.java	blob \| raw
-rwxr-xr-x	22849	SeqCanvas.java	blob \| raw
-rw-r--r--	44674	SeqPanel.java	blob \| raw
-rwxr-xr-x	25112	SequenceFetcher.java	blob \| raw
-rwxr-xr-x	11584	SequenceRenderer.java	blob \| raw
-rwxr-xr-x	8031	SliderPanel.java	blob \| raw
-rwxr-xr-x	9004	SplashScreen.java	blob \| raw
-rw-r--r--	5376	TextColourChooser.java	blob \| raw
-rwxr-xr-x	22664	TreeCanvas.java	blob \| raw
-rwxr-xr-x	21662	TreePanel.java	blob \| raw
-rwxr-xr-x	23896	UserDefinedColours.java	blob \| raw
-rw-r--r--	5256	UserQuestionnaireCheck.java	blob \| raw
-rw-r--r--	35020	VamsasApplication.java	blob \| raw
-rw-r--r--	8585	ViewSelectionMenu.java	blob \| raw
-rw-r--r--	23093	WebserviceInfo.java	blob \| raw
-rw-r--r--	42350	WsJobParameters.java	blob \| raw
-rw-r--r--	9878	WsParamSetManager.java	blob \| raw
-rw-r--r--	16710	WsPreferences.java	blob \| raw