source.jalview.org Git - jalview.git/tree

-rw-r--r--	111	.cvsignore	blob \| raw
-rw-r--r--	8585	AlignedCodonFrame.java	blob \| raw
-rwxr-xr-x	25208	Alignment.java	blob \| raw
-rwxr-xr-x	19630	AlignmentAnnotation.java	blob \| raw
-rwxr-xr-x	10564	AlignmentI.java	blob \| raw
-rwxr-xr-x	7567	AlignmentOrder.java	blob \| raw
-rw-r--r--	15936	AlignmentView.java	blob \| raw
-rwxr-xr-x	3087	Annotation.java	blob \| raw
-rwxr-xr-x	5394	BinaryNode.java	blob \| raw
-rwxr-xr-x	3399	BinarySequence.java	blob \| raw
-rw-r--r--	7252	CigarArray.java	blob \| raw
-rw-r--r--	19816	CigarBase.java	blob \| raw
-rw-r--r--	1793	CigarCigar.java	blob \| raw
-rw-r--r--	1470	CigarSimple.java	blob \| raw
-rw-r--r--	26244	ColumnSelection.java	blob \| raw
-rwxr-xr-x	4425	DBRefEntry.java	blob \| raw
-rwxr-xr-x	3399	DBRefSource.java	blob \| raw
-rw-r--r--	1655	FeatureProperties.java	blob \| raw
-rwxr-xr-x	1508	GraphLine.java	blob \| raw
-rwxr-xr-x	6335	HiddenSequences.java	blob \| raw
-rw-r--r--	10524	Mapping.java	blob \| raw
-rw-r--r--	1020	NodeTransformI.java	blob \| raw
-rwxr-xr-x	2547	PDBEntry.java	blob \| raw
-rwxr-xr-x	1443	Provenance.java	blob \| raw
-rwxr-xr-x	1353	ProvenanceEntry.java	blob \| raw
-rwxr-xr-x	4647	SearchResults.java	blob \| raw
-rw-r--r--	21302	SeqCigar.java	blob \| raw
-rwxr-xr-x	25555	Sequence.java	blob \| raw
-rwxr-xr-x	5936	SequenceFeature.java	blob \| raw
-rwxr-xr-x	24228	SequenceGroup.java	blob \| raw
-rwxr-xr-x	8206	SequenceI.java	blob \| raw
-rwxr-xr-x	4155	SequenceNode.java	blob \| raw
-rwxr-xr-x	1499	SequencePoint.java	blob \| raw
-rwxr-xr-x	1923	UniprotEntry.java	blob \| raw
-rwxr-xr-x	1121	UniprotFile.java	blob \| raw
-rwxr-xr-x	1208	UniprotProteinName.java	blob \| raw
-rwxr-xr-x	1347	UniprotSequence.java	blob \| raw
drwxr-xr-x	-	xdb	tree