8369364487290991b5080a6ca39b0f87a176ddc8
-rw-r--r-- 3929 BufferedLineReader.java
-rw-r--r-- 14867 HelpLinksChecker.java
drwxr-xr-x - InstallAnywhere
-rw-r--r-- 3849 JettyExamplesDir.java
-rw-r--r-- 11877 MessageBundleChecker.java
-rw-r--r-- 224277 ant-contrib-1.0b3.jar
-rw-r--r-- 1585 archive_building.sh
-rwxr-xr-x 30082 axis-ant.jar
drwxr-xr-x - biotools
drwxr-xr-x - channels
drwxr-xr-x - checkstyle
drwxr-xr-x - clover
-rwxr-xr-x 158 cmd-nox.sh
-rwxr-xr-x 1880 de-multi-release-jar.sh
drwxr-xr-x - debian
-rw-r--r-- 910 deprecation_auto_fixes.sh
-rwxr-xr-x 1079 dev_macos_install.sh
drwxr-xr-x - doc
-rwxr-xr-x 6069 download_jdks.sh
-rwxr-xr-x 6278 download_jres.sh
drwxr-xr-x - eclipse
drwxr-xr-x - fonts
-rw-r--r-- 4965 getJavaVersion.java
drwxr-xr-x - getdown
-rwxr-xr-x 4046 gff2annot.pl
lrwxrwxrwx 10 gradle-nox.sh -> cmd-nox.sh
-rw-r--r-- 45024 hamcrest-core-1.3.jar
-rwxr-xr-x 3061 help2Website.java
drwxr-xr-x - hugo
-rwxr-xr-x 3434 i18nAnt.xml
drwxr-xr-x - install4j
drwxr-xr-x - jalviewjs
-rwxr-xr-x 1664 jarunsigner.pl
-rwxr-xr-x 1562 jdeps_jlink_all.sh
-rwxr-xr-x 588596 jhall.jar
-rwxr-xr-x 1123 jhindexer
-rwxr-xr-x 401 jhindexer.jar
-rw-r--r-- 314932 junit-4.12.jar
-rwxr-xr-x 1162 mk_jalview_icons.sh
-rwxr-xr-x 1292 modulify-jar.sh
drwxr-xr-x - osx_signing
-rw-r--r-- 2117 patchGt.pl
-rwxr-xr-x 870966 proguard_5.3.3.jar
-rw-r--r-- 2253 publishHelp.xml
-rwxr-xr-x 276375 roxes-ant-tasks-1.2-2004-01-30.jar
-rw-r--r-- 136 showJVMVersion.java
-rw-r--r-- 1458 splitstockholm.pl
drwxr-xr-x - test
-rw-r--r-- 365 test2.png
drwxr-xr-x - testlibs
drwxr-xr-x - testnglibs
-rwxr-xr-x 161701 wsdl4j.jar