d21df3a4900299c30dc39b1231887f6a890f8bb7
-rwxr-xr-x 9422 AAFrequency.java
-rwxr-xr-x 14685 AlignSeq.java
-rwxr-xr-x 5195 AlignmentSorter.java
-rwxr-xr-x 5290 AlignmentUtil.java
-rwxr-xr-x 3307 CompareAlignments.java
-rwxr-xr-x 5525 Conservation.java
-rwxr-xr-x 17154 NJTree.java
-rwxr-xr-x 5120 PCA.java
-rwxr-xr-x 10365 SequenceFeatureFetcher.java