source.jalview.org Git - jalview.git/tree

-rw-r--r--	61	.cvsignore	blob \| raw
-rwxr-xr-x	20127	AAFrequency.java	blob \| raw
-rwxr-xr-x	28851	AlignSeq.java	blob \| raw
-rw-r--r--	7162	AlignmentAnnotationUtils.java	blob \| raw
-rwxr-xr-x	24896	AlignmentSorter.java	blob \| raw
-rw-r--r--	32655	AlignmentUtils.java	blob \| raw
-rw-r--r--	8831	AnnotationSorter.java	blob \| raw
-rw-r--r--	2572	CodingUtils.java	blob \| raw
-rw-r--r--	2238	CodonComparator.java	blob \| raw
-rwxr-xr-x	19096	Conservation.java	blob \| raw
-rw-r--r--	21957	CrossRef.java	blob \| raw
-rw-r--r--	2358	CrossRefTest.java	blob \| raw
-rw-r--r--	25521	Dna.java	blob \| raw
-rw-r--r--	8881	Finder.java	blob \| raw
-rw-r--r--	10961	Grouping.java	blob \| raw
-rw-r--r--	26380	NJTree.java	blob \| raw
-rwxr-xr-x	7763	PCA.java	blob \| raw
-rw-r--r--	6380	ParseProperties.java	blob \| raw
-rw-r--r--	8961	Rna.java	blob \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| raw
-rwxr-xr-x	8420	SeqsetUtils.java	blob \| raw
-rwxr-xr-x	8857	SequenceIdMatcher.java	blob \| raw
-rw-r--r--	13940	StructureFrequency.java	blob \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| raw
drwxr-xr-x	-	scoremodels	tree