import com.google.common.hash.HashCode
import com.google.common.hash.Hashing
import com.google.common.io.Files
+import org.jsoup.Jsoup
+import org.jsoup.nodes.Element
buildscript {
repositories {
}
dependencies {
classpath "com.vladsch.flexmark:flexmark-all:0.62.0"
+ classpath "org.jsoup:jsoup:1.14.3"
}
}
install4jBackground = string("${install4j_images_dir}/${install4j_background}")
install4jBuildDir = "${install4j_build_dir}/${JAVA_VERSION}"
install4jCheckSums = true
+
+ applicationName = "${jalview_name}"
switch (CHANNEL) {
case "BUILD":
}
JALVIEW_VERSION_UNDERSCORES = JALVIEW_VERSION.replaceAll("\\.", "_")
- hugoDataJsonFile = file("${jalviewDir}/${hugo_build_dir}/data/installers/installers-${JALVIEW_VERSION_UNDERSCORES}.json")
+ hugoDataJsonFile = file("${jalviewDir}/${hugo_build_dir}/${hugo_data_installers_dir}/installers-${JALVIEW_VERSION_UNDERSCORES}.json")
+ hugoArchiveMdFile = file("${jalviewDir}/${hugo_build_dir}/${hugo_version_archive_dir}/Version-${JALVIEW_VERSION_UNDERSCORES}/_index.md")
// override getdownAppBase if requested
if (findProperty("getdown_appbase_override") != null) {
// revert to LOCAL if empty string
jvlChannelName = jvlChannelName.replaceAll("[^\\w\\-]+", "_")
// install4j application and folder names
if (install4jSuffix == "") {
- install4jApplicationName = "${jalview_name}"
install4jBundleId = "${install4j_bundle_id}"
install4jWinApplicationId = install4j_release_win_application_id
} else {
- install4jApplicationName = "${jalview_name} ${install4jSuffix}"
+ applicationName = "${jalview_name} ${install4jSuffix}"
install4jBundleId = "${install4j_bundle_id}-" + install4jSuffix.toLowerCase()
// add int hash of install4jSuffix to the last part of the application_id
def id = install4j_release_win_application_id
}
// sanitise folder and id names
// install4jApplicationFolder = e.g. "Jalview Build"
- install4jApplicationFolder = install4jApplicationName
+ install4jApplicationFolder = applicationName
.replaceAll("[\"'~:/\\\\\\s]", "_") // replace all awkward filename chars " ' ~ : / \
.replaceAll("_+", "_") // collapse __
- install4jInternalId = install4jApplicationName
+ install4jInternalId = applicationName
.replaceAll(" ","_")
.replaceAll("[^\\w\\-\\.]", "_") // replace other non [alphanumeric,_,-,.]
.replaceAll("_+", "") // collapse __
//.replaceAll("_*-_*", "-") // collapse _-_
- install4jUnixApplicationFolder = install4jApplicationName
+ install4jUnixApplicationFolder = applicationName
.replaceAll(" ","_")
.replaceAll("[^\\w\\-\\.]", "_") // replace other non [alphanumeric,_,-,.]
.replaceAll("_+", "_") // collapse __
manifest {
attributes "Main-Class": main_class,
"Permissions": "all-permissions",
- "Application-Name": install4jApplicationName,
+ "Application-Name": applicationName,
"Codebase": application_codebase,
"Implementation-Version": JALVIEW_VERSION
}
}
manifest {
attributes "Implementation-Version": JALVIEW_VERSION,
- "Application-Name": install4jApplicationName
+ "Application-Name": applicationName
}
duplicatesStrategy "INCLUDE"
}
props.put("getdown_txt_title", jalview_name)
- props.put("getdown_txt_ui.name", install4jApplicationName)
+ props.put("getdown_txt_ui.name", applicationName)
// start with appbase
getdownTextLines += "appbase = ${getdownAppBase}"
variables = [
'JALVIEW_NAME': jalview_name,
- 'JALVIEW_APPLICATION_NAME': install4jApplicationName,
+ 'JALVIEW_APPLICATION_NAME': applicationName,
'JALVIEW_DIR': "../..",
'OSX_KEYSTORE': OSX_KEYSTORE,
'OSX_APPLEID': OSX_APPLEID,
group "website"
description "Create the installers-VERSION.json data file for installer files created"
+ mustRunAfter installers
+ mustRunAfter shadowJar
+ mustRunAfter sourceDist
+ mustRunAfter getdownArchive
+
def installersOutputTxt = file("${jalviewDir}/${install4jBuildDir}/output.txt")
def installersSha256 = file("${jalviewDir}/${install4jBuildDir}/sha256sums")
}
}
-dataInstallersJson.mustRunAfter installers
-dataInstallersJson.mustRunAfter shadowJar
-dataInstallersJson.mustRunAfter sourceDist
-dataInstallersJson.mustRunAfter getdownArchive
+def hugoTemplateSubstitutions(String input) {
+ def output = input
+ output = output.replaceAll("__DATE__", getDate("yyyy-MM-dd"))
+ output = output.replaceAll("__CHANNEL__", propertiesChannelName)
+ output = output.replaceAll("__APPLICATION_NAME__", applicationName)
+ output = output.replaceAll("__GIT_HASH__", gitHash)
+ output = output.replaceAll("__GIT_BRANCH__", gitBranch)
+ output = output.replaceAll("__VERSION__", JALVIEW_VERSION)
+ output = output.replaceAll("__JAVA_VERSION__", JAVA_VERSION)
+ output = output.replaceAll("__VERSION_UNDERSCORES__", JALVIEW_VERSION_UNDERSCORES)
+ return output
+}
+
+def ulToList(Element ul, int indent) {
+ def list = ""
+ ul.children().each { e ->
+ if (e.tagName().toLowerCase() == "ul") {
+ list = list.stripTrailing() + "\n"
+ list += ulToList(e, indent+1)
+ } else if (e.tagName().toLowerCase() == "li") {
+ def issues = []
+ def issuesText = ""
+ def mdItem = " " * indent + "- "
+ e.childNodes().any {n ->
+ if (n.nodeName().equals("#comment")) {
+ mdItem += "{{<comment>}}${n.getData()}{{</comment>}} "
+ issuesText = n.getData().trim()
+ issues = n.getData().trim().split(/[,\s]+/).findAll { it.startsWith("JAL-") }
+ return true
+ }
+ }
+ def safeText = issuesText.replaceAll('"', '\"')
+ def joinedIssues = issues.join(",")
+ def issuesLink = (issues.size() > 0) ?
+ " {{< jal issue=\"${joinedIssues}\" alt=\"${safeText}\" >}}"
+ : ""
+ def addedIssues = false
+ e.childNodes().each { node ->
+ if (node.nodeName().toLowerCase() == "ul") {
+ // add issues link before sub list if it's last
+ if (node.nextSibling() == null) {
+ mdItem += "${issuesLink}"
+ addedIssues = true
+ }
+ mdItem = mdItem.stripTrailing() + "\n"
+ mdItem += ulToList(node, indent+1)
+ } else if (node.nodeName() == "#text") {
+ mdItem += node.text()
+ } else if (node.nodeName().toLowerCase() == "strong") {
+ mdItem += "**${node.text()}**"
+ } else if (node.nodeName().toLowerCase() == "em") {
+ // if (true || (node.text().length() > 50 && node.text().count(" ") > 10) || (!node.nextSibling().text().startsWith("\\s*\\n"))) {
+ mdItem += "*${node.text()}*"
+ // } else {
+ // mdItem += "### "+node.text()
+ // }
+ } else if (node.nodeName().toLowerCase() == "br") {
+ mdItem += "<br/>\n"
+ } else if (node.nodeName().toLowerCase() == "a") {
+ mdItem += "[${node.text()}](${node.attr('href')})"
+ }
+ }
+ if (!addedIssues) {
+ mdItem += issuesLink
+ }
+ list += mdItem.stripTrailing()+"\n"
+ } else if (e.tagName().toLowerCase() == "div") {
+ e.children().each { eee ->
+ list += ulToList(eee, indent)
+ }
+ } else if (e.tagName().toLowerCase() == "strong") {
+ list += "**${e.text()}**"
+ } else if (e.tagName().toLowerCase() == "em") {
+ if (e.text().length() > 50 && e.text().count(" ") > 20) {
+ list += "*${e.text()}*"
+ } else {
+ list += "\n\n### ${e.text()}\n\n"
+ }
+ }
+ }
+ return list
+}
+
+task hugoTemplates {
+ group "website"
+ description "Create partially populated md pages for hugo website build"
+
+ def hugoTemplatesDir = file("${jalviewDir}/${hugo_templates_dir}")
+ def hugoBuildDir = "${jalviewDir}/${hugo_build_dir}"
+ def templateFiles = fileTree(dir: hugoTemplatesDir)
+
+ doFirst {
+ // specific release template for version archive
+ def summary = "${applicationName} ${JALVIEW_VERSION}"
+ def changes = ""
+ def oldDate = null
+ if (CHANNEL == "RELEASE") {
+ def releasesHtmlFile = file("${helpSourceDir}/${releases_html}")
+ //HTMLPARSE
+ def html = releasesHtmlFile.text
+ def doc = Jsoup.parse(html)
+ def table = doc.select("table").first()
+ def headings = table.select("tr").first().select("th").collect { it.text() }
+ def releaseRow = null
+ def trs = table.select("tr")
+ trs.any { tr ->
+ def tds = tr.select("td")
+ if (tds.size() == 0)
+ return false
+ def releaseTd = tds.first()
+ if (releaseTd.text().startsWith("${JALVIEW_VERSION} ")) {
+ releaseRow = tr
+ return true
+ }
+ }
+
+ if (releaseRow != null && headings != null && headings.size() == 3) {
+ def releaseTd = releaseRow.select("td").first()
+ def spaceIndex = releaseTd.text().indexOf(" ")
+ if (spaceIndex >= 0) {
+ oldDate = new Date().parse("dd/MM/yyyy", releaseTd.text().substring(spaceIndex+1))
+ }
+ def releaseCells = releaseRow.select("td")
+ if (releaseCells.size() == 3) {
+ def title1 = headings[1]
+ def title2 = headings[2]
+
+ def lastDotIndex = JALVIEW_VERSION.lastIndexOf(".")
+ if (lastDotIndex > 0) {
+ try {
+ def patchRelease = JALVIEW_VERSION.substring(lastDotIndex+1) as Integer
+ def patchReleaseString = null
+ if (patchRelease == 0) {
+ patchReleaseString = "first minor"
+ } else if (patchRelease == 1) {
+ patchReleaseString = "first patch"
+ } else if (patchRelease == 2) {
+ patchReleaseString = "second patch"
+ } else if (patchRelease == 3) {
+ patchReleaseString = "third patch"
+ } else if (patchRelease == 4) {
+ patchReleaseString = "fourth patch"
+ } else if (patchRelease == 5) {
+ patchReleaseString = "fifth patch"
+ } else if (patchRelease == 6) {
+ patchReleaseString = "sixth patch"
+ } else if (patchRelease == 7) {
+ patchReleaseString = "seventh patch"
+ } else if (patchRelease > 13 && (patchRelease % 10 == 1)) {
+ patchReleaseString += "st"
+ } else if (patchRelease > 13 && (patchRelease % 10 == 2)) {
+ patchReleaseString += "nd"
+ } else if (patchRelease > 13 && (patchRelease % 10 == 3)) {
+ patchReleaseString += "rd"
+ } else if (patchRelease != null) {
+ patchReleaseString += "th"
+ }
+ summary += (patchReleaseString != null) ? " is the ${patchReleaseString} release in the ${JALVIEW_VERSION.substring(0,lastDotIndex)} series." : ""
+ } catch(Exception e) {
+ summary = ""
+ }
+ }
+
+ [1,2].each { col ->
+ def colChanges = ""
+ if (headings[col] != null && headings[col].size() > 0) {
+ releaseCells[col].children().each { e ->
+ if (e.tagName().toLowerCase() == "ul" || e.tagName().toLowerCase() == "div") {
+ if (colChanges != "") {
+ colChanges = colChanges.stripTrailing() + "\n"
+ }
+ colChanges += ulToList(e, 0)
+ } else if (e.tagName().toLowerCase() == "em") {
+ colChanges += "\n\n### ${e.text()}\n\n"
+ }
+ }
+ }
+ if (colChanges != "") {
+ def className = headings[col].replaceAll(" ","_").toLowerCase().replaceAll("[^_a-z]","")
+ changes += "<div class=\"${className}\">\n\n## ${headings[col]}\n\n${colChanges}\n</div>\n\n"
+ }
+ }
+
+ if (changes != "") {
+ changes = "<div class=\"release_notes\">\n\n${changes}\n\n</div>"
+ }
+ }
+ }
+ }
+
+ templateFiles.each{ templateFile ->
+ def newFileName = string(hugoTemplateSubstitutions(templateFile.getName()))
+ def relPath = hugoTemplatesDir.toPath().relativize(templateFile.toPath()).getParent()
+ def newRelPathName = hugoTemplateSubstitutions( relPath.toString() )
+
+ def outPathName = string("${hugoBuildDir}/$newRelPathName")
+
+ copy {
+ from templateFile
+ rename(templateFile.getName(), newFileName)
+ into outPathName
+ }
+
+ def newFile = file("${outPathName}/${newFileName}".toString())
+ def content = newFile.text
+ // summary in version archive release pages only appears from 2.10.2b2 onwards
+ if (oldDate.format("yyyy") as Integer >= 2019 || JALVIEW_VERSION.startsWith("2.10")) {
+ def summaryFile = file("${jalviewDir}/${whatsnew_dir}/whatsnew-${JALVIEW_VERSION_UNDERSCORES}.md")
+ if (summaryFile.exists()) {
+ summary = summaryFile.text
+ } else {
+ summary = ""
+ }
+ content = content.replaceAll("__SUMMARY__", summary)
+ } else {
+ content = content.replaceAll("__SUMMARY__", "")
+ }
+ content = content.replaceAll("__CHANGES__", changes)
+ if (oldDate != null) {
+ if (oldDate[java.util.Calendar.YEAR] < 90) {
+ oldDate[java.util.Calendar.YEAR] += 2000
+ }
+ content = content.replaceAll("__DATE__", oldDate.format("yyyy-MM-dd"))
+ }
+ newFile.text = hugoTemplateSubstitutions(content)
+ }
+ }
+
+ inputs.dir(hugoTemplatesDir)
+ inputs.property("JALVIEW_VERSION", { JALVIEW_VERSION })
+ inputs.property("CHANNEL", { CHANNEL })
+}
task helppages {
git://source.jalview.org / jalview.git / blobdiff