JAL-2446 merged to spike branch

[jalview.git] / examples / appletParameters.html

diff --git a/examples/appletParameters.html b/examples/appletParameters.html
index 277fd69..04cc235 100644 (file)
--- a/examples/appletParameters.html
+++ b/examples/appletParameters.html
@@ -115,7 +115,7 @@ the applet can be interacted with <em>via</em> its
             <td>defaultColour</td>
             <td> <em>One of: </em><br>
               Clustal, Blosum62, % Identity, Hydrophobic, Zappo, Taylor, Helix 
-              Propensity, Strand Propensity, Turn Propensity, Buried Index, Nucleotide, T-Coffee Scores, RNA Helices</td>
+              Propensity, Strand Propensity, Turn Propensity, Buried Index, Nucleotide, Purine/Pyrimidine, T-Coffee Scores, RNA Helices</td>
             <td>Default is no colour.</td>
           </tr>
           <tr> 
@@ -159,6 +159,11 @@ the applet can be interacted with <em>via</em> its
             <td>Default is true.</td>
           </tr>
           <tr> 
+            <td>showOccupancy</td>
+            <td>true <em>or</em> false</td>
+            <td>Default is true.</td>
+          </tr>
+          <tr> 
             <td>sortBy</td>
             <td> Id <em>, </em> Pairwise Identity<em>, or</em> Length</td>
             <td> Sorts the alignment on startup</td>