+# Convention for properties. Read from gradle.properties, use lower_case_underlines for property names.
+# For properties set within build.gradle, use camelCaseNoSpace.
+#
+
jalviewDir = .
+#JAVA_VERSION = 1.8
JAVA_VERSION = 11
-JALVIEW_VERSION = DEVELOPMENT
+
+source_dir = src
+#source_dir = utils/jalviewjs/test/src
+
+test_source_dir = test
+#test_source_dir = utils/jalviewjs/test/test
+
+# JALVIEW_VERSION now being set by logic in build.gradle defaulting to looking at jalview.version property in RELEASE file
+#JALVIEW_VERSION = DEVELOPMENT
INSTALLATION = Source
jalview_keystore = keys/.keystore
jalview_keystore.pass = alignmentisfun
jalview_keyalg = SHA1withRSA
jalview_keydig = SHA1
-testngGroups = Functional
-
-javac_source = 11
-javac_target = 11
+testng_groups = Functional
+testng_excluded_groups =
j8libDir = j8lib
j11libDir = j11lib
-resourceDir = resources
-helpParentDir = help
-helpDir = help
-docDir = doc
-sourceDir = src
-schemaDir = schemas
-classesDir = classes
+resource_dir = resources
+help_parent_dir = help
+help_dir = help
+doc_dir = doc
+classes_dir = classes
clover = false
-use_clover = false
-cloverClassesDir = clover-classes
-cloverSourcesInstrDir = sources-instr
-packageDir = dist
-outputJar = jalview.jar
+clover_classes_dir = clover-classes
+clover_sources_instr_dir = clover-instr
+clover_report_dir = clover-report
+clover_lib_dir = utils/clover/lib
+cloverreport_mem = 2g
+cloverreport_jvmargs = -Dfile.encoding=UTF-8
+cloverreport_html_options =
+cloverreport_xml_options =
+package_dir = dist
+ARCHIVEDIR =
-testSourceDir = test
-testOutputDir = tests
-utilsDir = utils
+test_output_dir = tests
+utils_dir = utils
-buildPropertiesFile = .build_properties
+build_properties_file = .build_properties
application_codebase = *.jalview.org
-mainClass = jalview.bin.Jalview
-shadowJarMainClass = jalview.bin.Launcher
-launcherClass = jalview.bin.Jalview
+main_class = jalview.bin.Jalview
+shadow_jar_main_class = jalview.bin.Launcher
-gradlePluginsDir = gradle/plugins
+jalview_name = Jalview
+getdown_local = false
getdown_website_dir = getdown/website
getdown_resource_dir = resource
-getdown_app_dir = dist
-getdown_j11lib_dir = j11lib
+#getdown_j11lib_dir = j11lib
getdown_files_dir = getdown/files
-getdown_launcher = getdown/lib/getdown-launcher.jar
-getdown_core = getdown/lib/getdown-core-1.8.3-SNAPSHOT.jar
-getdown_lib1 = getdown/lib/commons-compress-1.18.jar
-getdown_base_txt = getdown/files/getdown.txt
-getdown_txt_title = Jalview
-getdown_channel_base = http://www.jalview.org/getdown/jalview
-getdown_channel_name = TEST
+getdown_lib_dir = getdown/lib
+getdown_launcher = getdown-launcher.jar
+getdown_launcher_local = getdown-launcher-local.jar
+getdown_launcher_new = getdown-launcher-new.jar
+getdown_core = getdown/lib/getdown-core.jar
+getdown_build_properties = build_properties
+getdown_launch_jvl_name = channel_launch
getdown_txt_allow_offline = true
-getdown_txt_jvmmempc = 95
-getdown_txt_multi_jvmarg = -Dgetdownappdir="%APPDIR%"
+getdown_txt_max_concurrent_downloads = 10
+# now got better defaults when not set
+#getdown_txt_jalview.jvmmempc = 90
+# now got better defaults when not set
+#getdown_txt_jalview.jvmmemmax = 32G
+getdown_txt_multi_jvmarg = -Dgetdownappdir=%APPDIR%
getdown_txt_strict_comments = true
-getdown_txt_title = Jalview
-getdown_txt_ui.name = Jalview
+getdown_txt_ui.progress_sync_before_shown = true
+getdown_txt_ui.progress_sync_after_shown = false
+getdown_txt_ui.keep_on_top = true
+getdown_txt_ui.display_appbase = true
+getdown_txt_ui.display_version = true
+getdown_txt_ui.min_show_seconds = 6
getdown_txt_ui.background = FFFFFF
-getdown_txt_ui.background_image = resources/images/jalview_logo_background_getdown-640x480.png
-getdown_txt_ui.error_background = resources/images/jetset_jalview_splash.png
-getdown_txt_ui.progress_image = resources/images/jalview_logo_background_getdown-progress.png
+getdown_txt_ui.background_image = utils/getdown/jalview_logo_background_getdown-640x480.png
+getdown_txt_ui.instant_background_image = utils/getdown/jalview_logo_background_getdown_instant-640x480.png
+getdown_txt_ui.error_background = utils/getdown/jalview_logo_background_getdown_error-640x480.png
+getdown_txt_ui.progress_image = utils/getdown/jalview_logo_background_getdown-progress.png
getdown_txt_ui.icon = resources/images/JalviewLogo_Huge.png
getdown_txt_ui.progress = 20, 440, 600, 22
getdown_txt_ui.progress_bar = AAAAFF
getdown_txt_ui.progress_text = 000000
getdown_txt_ui.status = 20, 380, 600, 58
getdown_txt_ui.status_text = 000066
-getdown_txt_ui.text_shadow = EEEEFF
-getdown_txt_ui.install_error = http://www.jalview.org/download/error
+#getdown_txt_ui.text_shadow = FFFFFF
+getdown_txt_ui.install_error = https://www.jalview.org/faq/getdownerror
getdown_txt_ui.mac_dock_icon = resources/images/jalview_logos.ico
getdown_alt_java8_min_version = 01080000
+getdown_alt_java8_max_version = 01089999
getdown_alt_java11_min_version = 11000000
-getdown_alt_java11_txt_multi_java_location = [windows-amd64] /getdown/jre/windows-jre11.tgz,[linux-amd64] /getdown/jre/linux-jre11.tgz,[mac os x] /getdown/jre/macos-jre11.tgz
-getdown_alt_java8_txt_multi_java_location = [windows-amd64] /getdown/jre/windows-jre1.8.tgz,[linux-amd64] /getdown/jre/linux-jre1.8.tgz,[mac os x] /getdown/jre/macos-jre1.8.tgz
-JRE_installs = /Users/bsoares/Java/installs
-Windows_JRE8 = OpenJDK8U-jdk_x64_windows_hotspot_8u202b08/jdk8u202-b08
-Mac_JRE8 = OpenJDK8U-jre_x64_mac_hotspot_8u202b08/jdk8u202-b08-jre/Contents/Home
-Linux_JRE8 = OpenJDK8U-jre_x64_linux_hotspot_8u202b08/jdk8u202-b08-jre
-Windows_JRE11 = OpenJDK11-jre_x64_windows_hotspot_11_28/jdk-11+28-jre
-Mac_JRE11 = OpenJDK11-jre_x64_mac_hotspot_11_28/jdk-11+28-jre/Contents/Home
-Linux_JRE11 = OpenJDK11-jre_x64_linux_hotspot_11_28/jdk-11+28-jre
+getdown_alt_java11_max_version =
+#getdown_alt_java11_txt_multi_java_location = [windows-amd64] /getdown/jre/windows-jre11.jar,[linux-amd64] /getdown/jre/linux-jre11.tgz,[mac os x] /getdown/jre/macos-jre11.tgz
+#getdown_alt_java8_txt_multi_java_location = [windows-amd64] /getdown/jre/windows-jre1.8.tgz,[linux-amd64] /getdown/jre/linux-jre1.8.tgz,[mac os x] /getdown/jre/macos-jre1.8.tgz
+jre_installs_dir = ~/buildtools/jre
j8libDir = j8lib
+j8digestonlyDir = j8digestonly
j11libDir = j11lib
j11modDir = j11mod
j11modules = com.sun.istack.runtime,com.sun.xml.bind,com.sun.xml.fastinfoset,com.sun.xml.streambuffer,com.sun.xml.txw2,com.sun.xml.ws.policy,java.activation,java.annotation,java.base,java.compiler,java.datatransfer,java.desktop,java.logging,java.management,java.management.rmi,java.naming,java.prefs,java.rmi,java.scripting,java.security.sasl,java.sql,java.xml,java.xml.bind,java.xml.soap,java.xml.ws,javax.jws,jdk.httpserver,jdk.jsobject,jdk.unsupported,jdk.xml.dom,org.jvnet.mimepull,org.jvnet.staxex,javax.servlet.api,java.ws.rs
+j11digestonlyDir = j11digestonly
+
+
+install4j_home_dir = ~/buildtools/install4j8
+install4j_copyright_message = ...
+install4j_bundle_id = org.jalview.jalview-desktop
+install4j_utils_dir = utils/install4j
+install4j_template = install4j8_template.install4j
+install4j_info_plist_file_associations = file_associations_auto-Info_plist.xml
+install4j_installer_file_associations = file_associations_auto-install4j8.xml
+#install4j_DMG_uninstaller_app_files = uninstall_old_jalview_files.xml
+install4j_build_dir = build/install4j
+install4j_media_types = windows,macosArchive,unixArchive,unixInstaller
+install4j_faster = false
+install4j_application_categories = Science;Biology;Java;
+install4j_release_win_application_id = 6595-2347-1923-0725
-install4jResourceDir = utils/install4j
-install4jTemplate = install4j_template.install4j
-install4jBuildDir = build/install4j
-install4jMediaTypes = windows,macosArchive,linuxRPM,linuxDeb
OSX_KEYSTORE =
OSX_KEYPASS =
JSIGN_SH = echo
-eclipse_extra_jdt_prefs_file = .settings/org.eclipse.jdt.core.jalview.prefs
+pandoc_exec = /usr/local/bin/pandoc,/usr/bin/pandoc
+dev = false
+
+CHANNEL=LOCAL
+getdown_channel_base = https://www.jalview.org/getdown
+getdown_app_dir_release = release
+getdown_app_dir_alt = alt
+getdown_app_dir_java = jre
+getdown_install_dir = install
+getdown_rsync_dest = /Volumes/jalview/docroot/getdown
+reportRsyncCommand =
+RUNRSYNC=false
+
+bamboo_channelbase = https://builds.jalview.org/browse
+bamboo_planKey =
+bamboo_getdown_channel_suffix = /latest/artifact/shared/getdown-channel
+
+eclipse_extra_jdt_prefs_file = utils/eclipse/org.eclipse.jdt.core.jalview.prefs
+eclipse_project_name = jalview
+eclipse_bin_dir = bin
+eclipse_debug = false
+
+# for developing in Eclipse as IDE, set this to automatically copy current swingjs/net.sf.j2s.core.jar to your dropins dir
+jalviewjs_eclipseIDE_auto_copy_j2s_plugin = false
+# Override this in a local.properties file
+jalviewjs_eclipse_root = ~/buildtools/eclipse/jee-2019-09
+
+jalviewjs_eclipse_dropins_dir = utils/jalviewjs/eclipse/dropins
+jalviewjs_swingjs_zip = swingjs/SwingJS-site.zip
+jalviewjs_j2s_plugin = swingjs/net.sf.j2s.core.jar
+jalviewjs_libjs_dir = utils/jalviewjs/libjs
+jalviewjs_site_resource_dir = utils/jalviewjs/site-resources
+jalviewjs_classlists_dir = utils/jalviewjs/classlists
+jalviewjs_classlist_jalview = utils/jalviewjs/_j2sclasslist.txt
+jalviewjs_j2s_settings = .j2s
+#jalviewjs_eclipse_workspace = ~/tmp/eclipse-workspace
+# these 3 files/dirs found in build/jalviewjs
+jalviewjs_eclipse_tmp_dropins_dir = eclipse_dropins
+jalviewjs_eclipse_workspace_location_file = eclipse_workspace_location
+jalviewjs_site_dir = site
+# these dirs are subdirs of the site dir
+jalviewjs_swingjs_subdir = swingjs
+jalviewjs_j2s_subdir = swingjs/j2s
+jalviewjs_js_subdir = swingjs/js
+#jalviewjs_eclipseBuildArg = build
+jalviewjs_eclipse_build_arg = cleanBuild
+jalviewjs_server_port = 9001
+jalviewjs_server_wait = 30
+jalviewjs_server_resource = /jalview_bin_Jalview.html
+jalviewjs_core_name = _jalview
+jalviewjs_name = JalviewJS
+jalviewjs_core_key = core
+#jalviewjs_core_key = preloadCore
+
+j2s.compiler.status = enable
+#j2s.site.directory = null ## site defined from buildDir+'/jalviewjs/'+jalviewjs_site_dir
+#j2s.log.methods.declared = j2s_methods_declared.log
+#j2s.log.methods.called = j2s_methods_called.log
+#a semicolon-separated list of package-level file paths to be excluded
+j2s.excluded.paths = test;testng;util
+#j2s.include.tests = true
+#j2s.testing = null
+#j2s.compiler.nonqualified.packages = null
+#j2s.compiler.nonqualified.classes = null
+#j2s.compiler.mode = debug
+#a semicolon-separated list of package (foo.) or class (foo.bar) replacements to be made
+j2s.class.replacements = org.apache.log4j.->jalview.javascript.log4j.
+j2s.template.html = utils/jalviewjs/template.html
+j2s_coretemplate_html = utils/jalviewjs/coretemplate.html
+#output file name for logging methods declared - delete the file to regenerate a listing
+#j2s.prop.j2s.log.methods.declared=swingjs/methodsDeclared_csv
+#output file name for logging methods called - delete the file to regenerate a listing
+#j2s.prop.j2s.log.methods_called=swingjs/methodsCalled_csv
+#if set, every instance of methods called will be logged
+#otherwise, only the first call to a method will be logged
+#output will be comma-separated: called method,caller class
+#j2s.prop.j2s.log.all.calls=true
+
+jalviewjs_j2s_transpile_stdout = j2s-transpile.out
+#jalviewjs_j2s_stderr = j2s-transpile.err # all going into out
+jalviewjs_j2s_to_console = true
+jalviewjs_j2s_closure_stdout = j2s-closure.out
+
+
+testp=gradle.properties
git://source.jalview.org / jalview.git / blobdiff