JAL-3210 removed 'all' core due to problems

[jalview.git] / gradle.properties

diff --git a/gradle.properties b/gradle.properties
index 6605fa9..b64eb11 100644 (file)
--- a/gradle.properties
+++ b/gradle.properties
@@ -2,6 +2,13 @@ jalviewDir = .
 
 #JAVA_VERSION = 1.8
 JAVA_VERSION = 11
+
+source_dir = src
+#source_dir = utils/jalviewjs/test/src
+
+test_source_dir = test
+#test_source_dir = utils/jalviewjs/test/test
+
 JALVIEW_VERSION = DEVELOPMENT
 INSTALLATION = Source
 jalview_keystore = keys/.keystore
@@ -18,14 +25,12 @@ testngGroups = Functional
 
 j8libDir = j8lib
 j11libDir = j11lib
-resourceDir = resources
-helpParentDir = help
-helpDir = help
-helpOutputDir = build/distribution/help
+resource_dir = resources
+help_parent_dir = help
+help_dir = help
 docDir = doc
-sourceDir = src
 schemaDir = schemas
-classesDir = classes
+classes_dir = classes
 examplesDir = examples
 clover = false
 use_clover = false
@@ -35,11 +40,10 @@ packageDir = dist
 ARCHIVEDIR =
 outputJar = jalview.jar
 
-testSourceDir = test
 testOutputDir = tests
 utilsDir = utils
 
-buildPropertiesFile = .build_properties
+build_properties_file = .build_properties
 application_codebase = *.jalview.org
 mainClass = jalview.bin.Jalview
 shadowJarMainClass = jalview.bin.Launcher
@@ -121,8 +125,6 @@ OSX_KEYSTORE =
 OSX_KEYPASS =
 JSIGN_SH = echo
 
-eclipse_extra_jdt_prefs_file = .settings/org.eclipse.jdt.core.jalview.prefs
-
 pandoc_exec = /usr/local/bin/pandoc,/usr/bin/pandoc
 dev = false
 
@@ -135,3 +137,76 @@ getdown_install_dir = install
 getdown_rsync_dest = /Volumes/jalview/docroot/getdown
 reportRsyncCommand =
 RUNRSYNC=false
+
+bamboo_channelbase = https://builds.jalview.org/browse
+bamboo_planKey = 
+bamboo_getdown_channel_suffix = /latest/artifact/shared/getdown-channel
+
+eclipse_extra_jdt_prefs_file = .settings/org.eclipse.jdt.core.jalview.prefs
+eclipse_project_name = jalview
+eclipse_bin_dir = bin
+eclipse_debug = false
+
+# for developing in Eclipse as IDE, set this to automatically copy current swingjs/net.sf.j2s.core.jar to your dropins dir
+jalviewjs_eclipseIDE_auto_copy_j2s_plugin = false
+# Override this in a local.properties file
+jalviewjs_eclipse_root = ~/buildtools/eclipse/jee-2019-09
+
+jalviewjs_eclipse_dropins_dir = utils/jalviewjs/eclipse/dropins
+jalviewjs_swingjs_zip = swingjs/SwingJS-site.zip
+jalviewjs_j2s_plugin = swingjs/net.sf.j2s.core.jar
+jalviewjs_libjs_dir = utils/jalviewjs/libjs
+jalviewjs_site_resource_dir = utils/jalviewjs/site-resources
+jalviewjs_classlists_dir = utils/jalviewjs/classlists
+jalviewjs_classlist_jalview = utils/jalviewjs/_j2sclasslist.txt
+jalviewjs_j2s_settings = .j2s
+#jalviewjs_eclipse_workspace = ~/tmp/eclipse-workspace
+# these 3 files/dirs found in build/jalviewjs
+jalviewjs_eclipse_tmp_dropins_dir = eclipse_dropins
+jalviewjs_eclipse_workspace_location_file = eclipse_workspace_location
+jalviewjs_site_dir = site
+# these dirs are subdirs of the site dir
+jalviewjs_swingjs_subdir = swingjs
+jalviewjs_j2s_subdir = swingjs/j2s
+jalviewjs_js_subdir = swingjs/js
+#jalviewjs_eclipseBuildArg = build
+jalviewjs_eclipse_build_arg = cleanBuild
+jalviewjs_server_port = 9001
+jalviewjs_server_wait = 30
+jalviewjs_server_resource = /jalview_bin_Jalview.html
+jalviewjs_core_name = _jalview
+jalviewjs_name = JalviewJS
+jalviewjs_core_key = core
+#jalviewjs_core_key = preloadCore
+
+j2s.compiler.status = enable
+#j2s.site.directory = null ## site defined from buildDir+'/jalviewjs/'+jalviewjs_site_dir
+#j2s.log.methods.declared = j2s_methods_declared.log
+#j2s.log.methods.called = j2s_methods_called.log
+#a semicolon-separated list of package-level file paths to be excluded
+j2s.excluded.paths = test;testng;util
+#j2s.include.tests = true
+#j2s.testing = null
+#j2s.compiler.nonqualified.packages = null
+#j2s.compiler.nonqualified.classes = null
+#j2s.compiler.mode = debug
+#a semicolon-separated list of package (foo.) or class (foo.bar) replacements to be made 
+j2s.class.replacements = org.apache.log4j.->jalview.javascript.log4j.
+j2s.template.html = utils/jalviewjs/template.html
+j2s_coretemplate_html = utils/jalviewjs/coretemplate.html
+#output file name for logging methods declared - delete the file to regenerate a listing 
+#j2s.prop.j2s.log.methods.declared=swingjs/methodsDeclared_csv
+#output file name for logging methods called - delete the file to regenerate a listing
+#j2s.prop.j2s.log.methods_called=swingjs/methodsCalled_csv
+#if set, every instance of methods called will be logged
+#otherwise, only the first call to a method will be logged 
+#output will be comma-separated: called method,caller class 
+#j2s.prop.j2s.log.all.calls=true
+
+jalviewjs_j2s_transpile_stdout = j2s-transpile.out
+#jalviewjs_j2s_stderr = j2s-transpile.err # all going into out
+jalviewjs_j2s_to_console = true
+jalviewjs_j2s_closure_stdout = j2s-closure.out
+
+
+testp=gradle.properties