JAL-3758 release Fri 25th Sep
[jalview.git] / help / help / html / releases.html
index 6b40e9e..9d3c0d2 100755 (executable)
@@ -57,11 +57,28 @@ li:before {
     </tr>
     <tr>
       <td width="60" align="center" nowrap><strong><a
+          id="Jalview.2.11.1">2.11.1</a><a id="Jalview.2.11.1.2">.2</a><br />
+          <em>25/09/2020</em></strong></td>
+      <td align="left" valign="top">
+        <ul>
+        </ul>
+      </td>
+      <td align="left" valign="top">
+        <ul>
+          <li>
+            <!-- JAL-3757 -->Fresh install of Jalview 2.11.1.1 reports
+            "Encountered problems opening
+            https://www.jalview.org/examples/exampleFile_2_7.jvp"
+          </li>
+        </ul>
+      </td>
+    </tr>
+    <tr>
+      <td width="60" align="center" nowrap><strong><a
           id="Jalview.2.11.1">2.11.1</a><a id="Jalview.2.11.1.1">.1</a><br />
-          <em>11/08/2020</em></strong></td>
+          <em>17/09/2020</em></strong></td>
       <td align="left" valign="top">
         <ul>
-          <!-- -->
           <li>
             <!-- JAL-3638 -->Shift+arrow keys navigate to next gap or
             residue in cursor mode
@@ -116,7 +133,7 @@ li:before {
           <li>
             <!-- JAL-3477 -->Improved built-in documentation and command
             line help for configuring Jalview's memory
-          </li>
+          </li>                   
         </ul>
       </td>
       <td align="left" valign="top">
@@ -136,6 +153,10 @@ li:before {
             doesn't slide selected sequences, just sequence under cursor
           </li>
           <li>
+            <!-- JAL-3732 -->Alt+Up/Down in cursor mode doesn't move
+            sequence under the cursor
+          </li>
+          <li>
             <!-- JAL-3613 -->Peptide-to-CDS tracking broken when
             multiple EMBL gene products shown forĀ a single contig
           </li>
@@ -182,6 +203,21 @@ li:before {
             file again, and if that fails, delete the original file and
             save in place.)
           </li>
+          <li>
+            <!-- JAL-3750 -->Cannot process alignments from HTTPS urls
+            via command line
+          </li>
+          <li>
+            <!-- JAL-3741 -->References to http://www.jalview.org in
+            program and documentation
+          </li>
+        </ul> <em>Launching Jalview</em>
+        <ul>
+          <li>
+            <!-- JAL-3718 -->Jalview application fails when launched the
+            first time for a version that has different jars to the
+            previous launched version.
+          </li>
         </ul> <em>Developing Jalview</em>
         <ul>
           <li>
@@ -189,9 +225,19 @@ li:before {
             data, causing cloverReport gradle task to fail with an
             OutOfMemory error.
           </li>
+          <li>
+            <!-- JAL-3280 -->Migrated the Jalview Version Checker to
+            monitor the release channel
+          </li>
         </ul> <em>New Known defects</em>
         <ul>
           <li>
+            <!-- JAL-3748 -->CDS shown in result of submitting proteins
+            in a CDS/Protein alignment to a web service is wrong when
+            proteins share a common transcript sequence (e.g.
+            genome of RNA viruses)
+          </li>
+          <li>
             <!-- JAL-3576 -->Co-located features exported and re-imported
             are ordered differently when shown on alignment and in
             tooltips. (Also affects v2.11.1.0)