git://source.jalview.org / jalview.git / blobdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
JAL-2738 copy to spikes/mungo
[jalview.git] / help / html / calculations / tree.html
diff --git a/help/html/calculations/tree.html b/help/html/calculations/tree.html
index 362d4cc..95904b6 100755 (executable)
--- a/help/html/calculations/tree.html
+++ b/help/html/calculations/tree.html
@@ -1,7 +1,7 @@
 <html>
 <!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -28,8 +28,8 @@
   </p>
   <p>
     Trees are calculated on either the complete alignment, or just the
-    currently selected group of sequences, using the functions in the <strong>Calculate&#8594;Calculate
-      tree</strong> submenu. Once calculated, trees are displayed in a new <a
+    currently selected group of sequences, via the <a href="calculations.html">calculations dialog</a> opened from the <strong>Calculate&#8594;Calculate
+      Tree or PCA...</strong> menu entry. Once calculated, trees are displayed in a new <a
       href="../calculations/treeviewer.html">tree viewing
       window</a>. There are four different calculations, using one of two
     distance measures and constructing the tree from one of two